RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ADAMTS1Q9UHI8 967 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 ESYT3A0FGR9 886 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 HLA-DOAP06340 250 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 ADAM9Q13443 819 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 PPP1R18Q6NYC8 613 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 TRIM59Q8IWR1 403 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 RABEP2Q9H5N1 569 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 SWAP70Q9UH65 585 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 RSPH10B2B2RC85 870 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 MEIS2O14770 477 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 TRIM66O15016 1216 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 PALMO75781 387 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 TRIM37O94972 964 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 RSPH10BP0C881 870 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 HOXA13P31271 388 aaPredicted RBP19.53■□□□□ 0.72
XRCC3-218ENST00000557439 MUM1L1Q5H9M0 696 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 HAUS3Q68CZ6 603 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 SLFN13Q68D06 897 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 LEKR1Q6ZMV7 388 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 CATSPER3Q86XQ3 398 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 CCDC65Q8IXS2 484 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 TEKT1Q969V4 418 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 ACBD3Q9H3P7 528 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 KCNMB3Q9NPA1 279 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 MED4Q9NPJ6 270 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 CEP72Q9P209 647 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 LTBP1Q14766 1721 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 ABCB11O95342 1321 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 SLC9A1P19634 815 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 CRKP46108 304 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 AARSP49588 968 aaKnown RBP eCLIP19.53■□□□□ 0.72
XRCC3-218ENST00000557439 SLC9C1Q4G0N8 1177 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 SIAH1Q8IUQ4 282 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 PROM2Q8N271 834 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 MMGT1Q8N4V1 131 aa19.53■□□□□ 0.72
XRCC3-218ENST00000557439 AENQ8WTP8 325 aaKnown RBP19.53■□□□□ 0.72
XRCC3-218ENST00000557439 IKQ13123 557 aaPredicted RBP19.52■□□□□ 0.72
XRCC3-218ENST00000557439 SH3BP5LQ7L8J4 393 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 TSEN2Q8NCE0 465 aaKnown RBP19.52■□□□□ 0.72
XRCC3-218ENST00000557439 NOX5Q96PH1 765 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 LRRC27Q9C0I9 530 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 VIPAS39Q9H9C1 493 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 PJA2O43164 708 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 NR2F2P24468 414 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 POLD1P28340 1107 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 SLC12A3P55017 1021 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 JAG1P78504 1218 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 KCNA1Q09470 495 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 KCNH2Q12809 1159 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 MEX3CQ5U5Q3 659 aaKnown RBP19.52■□□□□ 0.72
XRCC3-218ENST00000557439 LRRC31Q6UY01 552 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 AFAP1L1Q8TED9 768 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 NT5C3AQ9H0P0 336 aa19.52■□□□□ 0.72
XRCC3-218ENST00000557439 DHX36Q9H2U1 1008 aaKnown RBP19.52■□□□□ 0.72
XRCC3-218ENST00000557439 SFI1A8K8P3 1242 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 FAM86B1E9PN63 330 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 FAM86B2P0C5J1 330 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 MYBP10242 640 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 MCM3P25205 808 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 ARHGAP4P98171 946 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 MAPK8IP2Q13387 824 aaPredicted RBP19.51■□□□□ 0.71
XRCC3-218ENST00000557439 HYIQ5T013 277 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 SFR1Q86XK3 245 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 IQCDQ96DY2 449 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 KDM3AQ9Y4C1 1321 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 GCFC2P16383 781 aaKnown RBP19.51■□□□□ 0.71
XRCC3-218ENST00000557439 HOXD13P35453 343 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 SPIRE1Q08AE8 756 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 TRADDQ15628 312 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 CERKLQ49MI3 558 aaPredicted RBP19.51■□□□□ 0.71
XRCC3-218ENST00000557439 SPICE1Q8N0Z3 855 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 PROCA1Q8NCQ7 364 aaPredicted RBP19.51■□□□□ 0.71
XRCC3-218ENST00000557439 REEP2Q9BRK0 252 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 EHD4Q9H223 541 aa19.51■□□□□ 0.71
XRCC3-218ENST00000557439 SSU72P8A0A1W2PR75 194 aa19.5■□□□□ 0.71
XRCC3-218ENST00000557439 SERPING1P05155 500 aa19.5■□□□□ 0.71
XRCC3-218ENST00000557439 TCP1P17987 556 aaKnown RBP19.5■□□□□ 0.71
XRCC3-218ENST00000557439 EPS15P42566 896 aa19.5■□□□□ 0.71
XRCC3-218ENST00000557439 IQCEQ6IPM2 695 aa19.5■□□□□ 0.71
XRCC3-218ENST00000557439 FAM184BQ9ULE4 1060 aa19.5■□□□□ 0.71
XRCC3-218ENST00000557439 GOLGA6BA6NDN3 693 aa19.5■□□□□ 0.71
XRCC3-218ENST00000557439 TULP2O00295 520 aa19.5■□□□□ 0.71
XRCC3-218ENST00000557439 KLHL30Q0D2K2 578 aa19.5■□□□□ 0.71
XRCC3-218ENST00000557439 KIAA0753Q2KHM9 967 aa19.5■□□□□ 0.71
XRCC3-218ENST00000557439 DNAJC21Q5F1R6 531 aaKnown RBP19.5■□□□□ 0.71
XRCC3-218ENST00000557439 TTC19Q6DKK2 380 aaPredicted RBP19.5■□□□□ 0.71
XRCC3-218ENST00000557439 FAM198AQ9UFP1 575 aa19.5■□□□□ 0.71
XRCC3-218ENST00000557439 GLI1P08151 1106 aa19.49■□□□□ 0.71
XRCC3-218ENST00000557439 SPATA31C1P0DKV0 1188 aa19.49■□□□□ 0.71
XRCC3-218ENST00000557439 GIT2Q14161 759 aa19.49■□□□□ 0.71
XRCC3-218ENST00000557439 DCAF17Q5H9S7 520 aaPredicted RBP19.49■□□□□ 0.71
XRCC3-218ENST00000557439 ETNPPLQ8TBG4 499 aa19.49■□□□□ 0.71
XRCC3-218ENST00000557439 GANQ9H2C0 597 aa19.49■□□□□ 0.71
XRCC3-218ENST00000557439 RGL1Q9NZL6 768 aa19.49■□□□□ 0.71
XRCC3-218ENST00000557439 AJAP1Q9UKB5 411 aaPredicted RBP19.49■□□□□ 0.71
XRCC3-218ENST00000557439 KLRG2A4D1S0 409 aaPredicted RBP19.49■□□□□ 0.71
XRCC3-218ENST00000557439 CLIC2O15247 247 aa19.49■□□□□ 0.71
XRCC3-218ENST00000557439 CASP4P49662 377 aa19.49■□□□□ 0.71
XRCC3-218ENST00000557439 C8orf74Q6P047 294 aa19.49■□□□□ 0.71
XRCC3-218ENST00000557439 GJB7Q6PEY0 223 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms