RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ARVCFO00192 962 aa19.78■□□□□ 0.76
SHMT2-225ENST00000556798 CHMP2AO43633 222 aa19.78■□□□□ 0.76
SHMT2-225ENST00000556798 PQBP1O60828 265 aaKnown RBP19.78■□□□□ 0.76
SHMT2-225ENST00000556798 GAS7O60861 476 aa19.78■□□□□ 0.76
SHMT2-225ENST00000556798 MCM7P33993 719 aa19.78■□□□□ 0.76
SHMT2-225ENST00000556798 PSEN2P49810 448 aa19.78■□□□□ 0.76
SHMT2-225ENST00000556798 NBPF20Q3BBV1 942 aa19.78■□□□□ 0.76
SHMT2-225ENST00000556798 TTC38Q5R3I4 469 aa19.78■□□□□ 0.76
SHMT2-225ENST00000556798 FERMT3Q86UX7 667 aa19.78■□□□□ 0.76
SHMT2-225ENST00000556798 TEKT3Q9BXF9 490 aa19.78■□□□□ 0.76
SHMT2-225ENST00000556798 KCNMB3Q9NPA1 279 aa19.78■□□□□ 0.76
SHMT2-225ENST00000556798 PCDH10Q9P2E7 1040 aa19.78■□□□□ 0.76
SHMT2-225ENST00000556798 NOL7Q9UMY1 257 aaKnown RBP19.78■□□□□ 0.76
SHMT2-225ENST00000556798 EVI5O60447 810 aa19.77■□□□□ 0.76
SHMT2-225ENST00000556798 NEMFO60524 1076 aa19.77■□□□□ 0.76
SHMT2-225ENST00000556798 PSMD10O75832 226 aa19.77■□□□□ 0.76
SHMT2-225ENST00000556798 TLE2Q04725 743 aa19.77■□□□□ 0.76
SHMT2-225ENST00000556798 MFSD10Q14728 455 aa19.77■□□□□ 0.76
SHMT2-225ENST00000556798 ZNF174Q15697 407 aa19.77■□□□□ 0.76
SHMT2-225ENST00000556798 KIAA0753Q2KHM9 967 aa19.77■□□□□ 0.76
SHMT2-225ENST00000556798 FAM47CQ5HY64 1035 aa19.77■□□□□ 0.76
SHMT2-225ENST00000556798 HAS1Q92839 578 aa19.77■□□□□ 0.76
SHMT2-225ENST00000556798 RIT2Q99578 217 aa19.77■□□□□ 0.76
SHMT2-225ENST00000556798 TCEAL9Q9UHQ7 104 aa19.77■□□□□ 0.76
SHMT2-225ENST00000556798 LTBP2Q14767 1821 aa19.76■□□□□ 0.75
SHMT2-225ENST00000556798 CDK7P50613 346 aa19.76■□□□□ 0.75
SHMT2-225ENST00000556798 TOB1P50616 345 aaPredicted RBP19.76■□□□□ 0.75
SHMT2-225ENST00000556798 KRT76Q01546 638 aa19.76■□□□□ 0.75
SHMT2-225ENST00000556798 CALCRLQ16602 461 aa19.76■□□□□ 0.75
SHMT2-225ENST00000556798 C1orf53Q5VUE5 145 aa19.76■□□□□ 0.75
SHMT2-225ENST00000556798 ZNF746Q6NUN9 644 aaPredicted RBP19.76■□□□□ 0.75
SHMT2-225ENST00000556798 SLC43A3Q8NBI5 491 aa19.76■□□□□ 0.75
SHMT2-225ENST00000556798 PCYT2Q99447 389 aa19.76■□□□□ 0.75
SHMT2-225ENST00000556798 KATNAL1Q9BW62 490 aa19.76■□□□□ 0.75
SHMT2-225ENST00000556798 TMEM60Q9H2L4 133 aa19.76■□□□□ 0.75
SHMT2-225ENST00000556798 UNC45AQ9H3U1 944 aa19.76■□□□□ 0.75
SHMT2-225ENST00000556798 CEP290O15078 2479 aa19.76■□□□□ 0.75
SHMT2-225ENST00000556798 H3BRB1 525 aa19.75■□□□□ 0.75
SHMT2-225ENST00000556798 HAS3O00219 553 aa19.75■□□□□ 0.75
SHMT2-225ENST00000556798 MARCH6O60337 910 aa19.75■□□□□ 0.75
SHMT2-225ENST00000556798 SUPT20HL2P0C7V6 817 aa19.75■□□□□ 0.75
SHMT2-225ENST00000556798 MARK3P27448 753 aa19.75■□□□□ 0.75
SHMT2-225ENST00000556798 TRAPPC10P48553 1259 aa19.75■□□□□ 0.75
SHMT2-225ENST00000556798 BECN1Q14457 450 aa19.75■□□□□ 0.75
SHMT2-225ENST00000556798 GLG1Q92896 1179 aa19.75■□□□□ 0.75
SHMT2-225ENST00000556798 TUT1Q9H6E5 874 aaKnown RBP19.75■□□□□ 0.75
SHMT2-225ENST00000556798 MTMR6Q9Y217 621 aa19.75■□□□□ 0.75
SHMT2-225ENST00000556798 SAMM50Q9Y512 469 aa19.75■□□□□ 0.75
SHMT2-225ENST00000556798 EMSYQ7Z589 1322 aa19.75■□□□□ 0.75
SHMT2-225ENST00000556798 BACH1O14867 736 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 TBX3O15119 743 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 STX6O43752 255 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 LGR5O75473 907 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 ATG7O95352 703 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 MIS18BP1Q6P0N0 1132 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 ABHD15Q6UXT9 468 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 ANKRD33Q7Z3H0 272 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 CCDC60Q8IWA6 550 aaPredicted RBP19.74■□□□□ 0.75
SHMT2-225ENST00000556798 FAM126BQ8IXS8 530 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 FAM20AQ96MK3 541 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 TRMT13Q9NUP7 481 aaKnown RBP19.74■□□□□ 0.75
SHMT2-225ENST00000556798 VAV3Q9UKW4 847 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 ZNF215Q9UL58 517 aaPredicted RBP19.74■□□□□ 0.75
SHMT2-225ENST00000556798 PCDHB6Q9Y5E3 794 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 MROH7Q68CQ1 1323 aa19.74■□□□□ 0.75
SHMT2-225ENST00000556798 WDR64B1ANS9 1081 aa19.73■□□□□ 0.75
SHMT2-225ENST00000556798 B4GALT4O60513 344 aa19.73■□□□□ 0.75
SHMT2-225ENST00000556798 BAG4O95429 457 aaKnown RBP19.73■□□□□ 0.75
SHMT2-225ENST00000556798 RESTQ13127 1097 aa19.73■□□□□ 0.75
SHMT2-225ENST00000556798 NFRKBQ6P4R8 1299 aa19.73■□□□□ 0.75
SHMT2-225ENST00000556798 SMAP1Q8IYB5 467 aaPredicted RBP19.73■□□□□ 0.75
SHMT2-225ENST00000556798 C7orf31Q8N865 590 aa19.73■□□□□ 0.75
SHMT2-225ENST00000556798 TRPV6Q9H1D0 765 aa19.73■□□□□ 0.75
SHMT2-225ENST00000556798 SMARCAD1Q9H4L7 1026 aa19.73■□□□□ 0.75
SHMT2-225ENST00000556798 AZI2Q9H6S1 392 aa19.73■□□□□ 0.75
SHMT2-225ENST00000556798 PRDM5Q9NQX1 630 aaPredicted RBP19.73■□□□□ 0.75
SHMT2-225ENST00000556798 DISC1Q9NRI5 854 aa19.73■□□□□ 0.75
SHMT2-225ENST00000556798 HDAC6Q9UBN7 1215 aa19.73■□□□□ 0.75
SHMT2-225ENST00000556798 ZMYND8Q9ULU4 1186 aaPredicted RBP19.73■□□□□ 0.75
SHMT2-225ENST00000556798 IGKV6D-21A0A0A0MT36 114 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 DCDC2CA8MYV0 355 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 PSAPP07602 524 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 TXKP42681 527 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 STAT5BP51692 787 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 FAAP100Q0VG06 881 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 RILPL1Q5EBL4 403 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 FOXD4L5Q5VV16 416 aaPredicted RBP19.72■□□□□ 0.75
SHMT2-225ENST00000556798 SWSAP1Q6NVH7 229 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 B3GNT9Q6UX72 402 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 MIER3Q7Z3K6 550 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 BRAPQ7Z569 592 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 SH3RF1Q7Z6J0 888 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 SLFN12Q8IYM2 578 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 FOXD4L4Q8WXT5 416 aaPredicted RBP19.72■□□□□ 0.75
SHMT2-225ENST00000556798 MTMR9Q96QG7 549 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 RNPEPQ9H4A4 650 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 ZNF302Q9NR11 478 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 PDLIM7Q9NR12 457 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 ERAP1Q9NZ08 941 aa19.72■□□□□ 0.75
SHMT2-225ENST00000556798 PCDHA10Q9Y5I2 948 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms