RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	ADAL	Q6DHV7	355 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	NLRX1	Q86UT6	975 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	SLFN12	Q8IYM2	578 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	KRI1	Q8N9T8	703 aa	Known RBP	12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	CYP2W1	Q8TAV3	490 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	ETNPPL	Q8TBG4	499 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	HAS1	Q92839	578 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	CDHR1	Q96JP9	859 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	LMBRD1	Q9NUN5	540 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	FBXO2	Q9UK22	296 aa	Predicted RBP	12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	PCDHA7	Q9UN72	937 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	LAMA2	P24043	3122 aa	Known RBP	12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907	LCT	P09848	1927 aa		12.78	□□□□□ -0.36
RAD51B-222	ENST00000555907		A0A1W2PQ27	194 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907		A0A1W2PQ64	194 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907		A0A1W2PQD8	194 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	SPATA31C2	B4DYI2	1134 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	MSH4	O15457	936 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	FIBP	O43427	364 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	CUTA	O60888	179 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	RGS20	O76081	388 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	PGK1	P00558	417 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	OR52Z1	P0C646	297 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	TGFB3	P10600	412 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	RAG1	P15918	1043 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	FXR2	P51116	673 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	PDE4D	Q08499	809 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	PRR16	Q569H4	304 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	KCNV1	Q6PIU1	500 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	DTHD1	Q6ZMT9	781 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	ARMCX2	Q7L311	632 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	RNF180	Q86T96	592 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	PLA2G4D	Q86XP0	818 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	SYMPK	Q92797	1274 aa	Known RBP	12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	SLC5A5	Q92911	643 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	LENG1	Q96BZ8	264 aa	Predicted RBP	12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	FAM184B	Q9ULE4	1060 aa		12.77	□□□□□ -0.37
RAD51B-222	ENST00000555907	TMEM265	A0A087WTH1	108 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	FAM237A	A0A1B0GTK4	181 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	RBM47	A0AV96	593 aa	Known RBP	12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	DDX11L8	A8MPP1	907 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	TNFRSF10A	O00220	468 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	PRPF40A	O75400	957 aa	Known RBP	12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	AR	P10275	920 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	MYCL	P12524	364 aa	Predicted RBP	12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	MARCKS	P29966	332 aa	Predicted RBP	12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	LONP1	P36776	959 aa	Known RBP	12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	ME1	P48163	572 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	UBE2H	P62256	183 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	ACVR2B	Q13705	512 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	IL17A	Q16552	155 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	GNPTAB	Q3T906	1256 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	RIT2	Q99578	217 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	SENP7	Q9BQF6	1050 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	WDR11	Q9BZH6	1224 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	ABHD16B	Q9H3Z7	469 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	GDPD2	Q9HCC8	539 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	KCNH7	Q9NS40	1196 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	TBC1D22B	Q9NU19	505 aa		12.76	□□□□□ -0.37
RAD51B-222	ENST00000555907	CLTB	P09497	229 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	CMA1	P23946	247 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	DNAJB2	P25686	324 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	MTMR1	Q13613	665 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	CCDC144B	Q3MJ40	725 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	TJAP1	Q5JTD0	557 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	B3GNT9	Q6UX72	402 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	IGSF22	Q8N9C0	903 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	AK8	Q96MA6	479 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	AGO4	Q9HCK5	861 aa	Known RBP	12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	VTA1	Q9NP79	307 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	PCDHA12	Q9UN75	941 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	PHF24	Q9UPV7	400 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	STK24	Q9Y6E0	443 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	PRUNE2	Q8WUY3	3088 aa		12.75	□□□□□ -0.37
RAD51B-222	ENST00000555907	LRRC37A2	A6NM11	1700 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	VCAN	P13611	3396 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	NFASC	O94856	1347 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	SYNRG	Q9UMZ2	1314 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	GRXCR1	A8MXD5	290 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	IPO5	O00410	1097 aa	Known RBP	12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	DHX15	O43143	795 aa	Known RBP	12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	SLC26A4	O43511	780 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	ADAMTS4	O75173	837 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	DUSP11	O75319	330 aa	Known RBP	12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	PSMD10	O75832	226 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	TXK	P42681	527 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	FPGS	Q05932	587 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	SEMA3F	Q13275	785 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	SNX17	Q15036	470 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	NFKBIB	Q15653	356 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	CCDC85B	Q15834	202 aa	Predicted RBP	12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	CCDC62	Q6P9F0	684 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	ZNF577	Q9BSK1	485 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	RAB34	Q9BZG1	259 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	KATNBL1	Q9H079	304 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	TTC12	Q9H892	705 aa	Predicted RBP	12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	TMEM39A	Q9NV64	488 aa		12.74	□□□□□ -0.37
RAD51B-222	ENST00000555907	MRVI1	Q9Y6F6	885 aa		12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms