RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CYP3A4P08684 503 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 ZNF286BP0CG31 522 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 ICAM3P32942 547 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 CPT1AP50416 773 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 USP11P51784 963 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 ACLYP53396 1101 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 NEDD9Q14511 834 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 HSDL1Q3SXM5 330 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 BRDTQ58F21 947 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-213ENST00000555386 UTP14CQ5TAP6 766 aaKnown RBP11.13□□□□□ -0.63
PSEN1-213ENST00000555386 MYSM1Q5VVJ2 828 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 NECAB2Q7Z6G3 386 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 TEX2Q8IWB9 1127 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 TNFRSF25Q93038 417 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 CDHR1Q96JP9 859 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 SPATA32Q96LK8 384 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 SDF4Q9BRK5 362 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 ZNF577Q9BSK1 485 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 UPF3AQ9H1J1 476 aaKnown RBP11.13□□□□□ -0.63
PSEN1-213ENST00000555386 C11orf49Q9H6J7 331 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 AGO4Q9HCK5 861 aaKnown RBP11.13□□□□□ -0.63
PSEN1-213ENST00000555386 DDX19AQ9NUU7 478 aaKnown RBP11.13□□□□□ -0.63
PSEN1-213ENST00000555386 DDX25Q9UHL0 483 aaKnown RBP11.13□□□□□ -0.63
PSEN1-213ENST00000555386 MYH9P35579 1960 aaKnown RBP11.13□□□□□ -0.63
PSEN1-213ENST00000555386 PDE4DIPQ5VU43 2346 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 IGLV3-22A0A075B6J6 115 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 GOLGA6L4A6NEF3 574 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 WNT7AO00755 349 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 CTAGE5O15320 804 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 GTPBP6O43824 516 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 SLC37A4O43826 429 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 ZEB2O60315 1214 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 CCDC192P0DO97 292 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 TGFB3P10600 412 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 KCNA2P16389 499 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 MCM7P33993 719 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 MNX1P50219 401 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 PSMC6P62333 389 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 LAMC2Q13753 1193 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 ZNF174Q15697 407 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 NOSTRINQ8IVI9 506 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 KLHDC9Q8NEP7 349 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 LEO1Q8WVC0 666 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 CRYGNQ8WXF5 182 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 FOXP1Q9H334 677 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 TCEAL9Q9UHQ7 104 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 TRIP12Q14669 1992 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 CEP290O15078 2479 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 WDR81Q562E7 1941 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 A0A1W2PQ45 241 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 A0A1W2PQY0 241 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 IPO5O00410 1097 aaKnown RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 MSH4O15457 936 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 CHMP2AO43633 222 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 ZNF500O60304 480 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 MMP3P08254 477 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 SETQ01105 290 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 ITGB3BPQ13352 177 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 TRMT1LQ7Z2T5 733 aaKnown RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 ANKLE1Q8NAG6 615 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 PCSK9Q8NBP7 692 aaKnown RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 RNF214Q8ND24 703 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 JPH1Q9HDC5 661 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-213ENST00000555386 STARD7Q9NQZ5 370 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 Q9Y3F1 56 aa11.12□□□□□ -0.63
PSEN1-213ENST00000555386 ALPK3Q96L96 1907 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 TNRC18O15417 2968 aaPredicted RBP11.11□□□□□ -0.63
PSEN1-213ENST00000555386 GAS7O60861 476 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 CIITAP33076 1130 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 DGKDQ16760 1214 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 FAM47CQ5HY64 1035 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 LRCH2Q5VUJ6 765 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 METTL7BQ6UX53 244 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 RBM43Q6ZSC3 357 aaKnown RBP11.11□□□□□ -0.63
PSEN1-213ENST00000555386 NIPA1Q7RTP0 329 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 TRIM50Q86XT4 487 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 GIMAP8Q8ND71 665 aaPredicted RBP11.11□□□□□ -0.63
PSEN1-213ENST00000555386 PPTC7Q8NI37 304 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 DPF3Q92784 378 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 LENG9Q96B70 501 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 GLT1D1Q96MS3 346 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 ZNF396Q96N95 335 aaPredicted RBP11.11□□□□□ -0.63
PSEN1-213ENST00000555386 SENP7Q9BQF6 1050 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 NUP62CLQ9H1M0 184 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 RYDENQ9NUL5 291 aaKnown RBP11.11□□□□□ -0.63
PSEN1-213ENST00000555386 PCDH10Q9P2E7 1040 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 SLC9A2Q9UBY0 812 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 ATP11BQ9Y2G3 1177 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 ZKSCAN5Q9Y2L8 839 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 SAMM50Q9Y512 469 aa11.11□□□□□ -0.63
PSEN1-213ENST00000555386 MOXD2PA6NHM9 499 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 A6NJR5 290 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 STK25O00506 426 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 MAFGO15525 162 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 CAVIN2O95810 425 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 U2AF2P26368 475 aaKnown RBP eCLIP11.1□□□□□ -0.63
PSEN1-213ENST00000555386 MARK3P27448 753 aa11.1□□□□□ -0.63
PSEN1-213ENST00000555386 CST5P28325 142 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-213ENST00000555386 TCF7P36402 384 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms