RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PDGFDQ9GZP0 370 aaPredicted RBP7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 ACSS2Q9NR19 701 aa7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 KCNH7Q9NS40 1196 aa7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 B3GALT1Q9Y5Z6 326 aa7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 ZC3H12DA2A288 527 aaKnown RBP7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 BIN1O00499 593 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 SCDO00767 359 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 SGSM2O43147 1006 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 KATNA1O75449 491 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 KIF11P52732 1056 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 RAB3GAP1Q15042 981 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 RGL3Q3MIN7 710 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 ODR4Q5SWX8 454 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 ADGRF1Q5T601 910 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 DLG3Q92796 817 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 SLC5A5Q92911 643 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 H2AFY2Q9P0M6 372 aaPredicted RBP7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 KLHL42Q9P2K6 505 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 SIT1Q9Y3P8 196 aa7.37□□□□□ -1.23
CKS1BP1-201ENST00000555221 TCRBV5S2A0A599 114 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 NUDT19A8MXV4 375 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 ABLIM1O14639 778 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 CYP17A1P05093 508 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 PTPN1P18031 435 aaKnown RBP7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 MAPKAPK2P49137 400 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 ITKQ08881 620 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 DDB1Q16531 1140 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 CPZQ66K79 652 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 OLFML2BQ68BL8 750 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 CC2D1AQ6P1N0 951 aaPredicted RBP7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 HDGFL2Q7Z4V5 671 aaPredicted RBP7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 TTLL11Q8NHH1 800 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 MTMR8Q96EF0 704 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 TSPAN17Q96FV3 270 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 MENTQ9BUN1 341 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 ZFP64Q9NPA5 681 aa7.36□□□□□ -1.23
CKS1BP1-201ENST00000555221 OR14I1A6ND48 311 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 DVL2O14641 736 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 BUB1BO60566 1050 aaPredicted RBP7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 SLC9A1P19634 815 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 LSP1P33241 339 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 PDE6BP35913 854 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 PHC1P78364 1004 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 MTMR1Q13613 665 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 GPR158Q5T848 1215 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 FYB2Q5VWT5 728 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 BTBD8Q5XKL5 378 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 RPTNQ6XPR3 784 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 CBLL1Q75N03 491 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 IRF2BP1Q8IU81 584 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 ZZZ3Q8IYH5 903 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 CNTD1Q8N815 330 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 COG1Q8WTW3 980 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 ELF4Q99607 663 aaPredicted RBP7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 RXFP1Q9HBX9 757 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 TOMM22Q9NS69 142 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 RIC8BQ9NVN3 520 aa7.35□□□□□ -1.23
CKS1BP1-201ENST00000555221 K7ESF4 209 aa7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 TGM5O43548 720 aa7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 PRKD3O94806 890 aa7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 GLI1P08151 1106 aa7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 SDHBP21912 280 aa7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 PRR5P85299 388 aa7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 TMEM132BQ14DG7 1078 aa7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 KCNMB1Q16558 191 aa7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 SYDE2Q5VT97 1194 aa7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 FSTL4Q6MZW2 842 aa7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 ZC3H14Q6PJT7 736 aaKnown RBP7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 RBM12BQ8IXT5 1001 aaKnown RBP7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 ASPSCR1Q9BZE9 553 aa7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 TELO2Q9Y4R8 837 aa7.34□□□□□ -1.23
CKS1BP1-201ENST00000555221 FAM90A27PA6NNH2 459 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 ALDH1L1O75891 902 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 LTFP02788 710 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 SDHAP31040 664 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 FNTBP49356 437 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 SMAD3P84022 425 aaKnown RBP7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 LRRC32Q14392 662 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 TERF2Q15554 542 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 SMAD2Q15796 467 aaKnown RBP7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 PLEKHN1Q494U1 663 aaPredicted RBP7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 BROXQ5VW32 411 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 ZSWIM9Q86XI8 627 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 NME9Q86XW9 330 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 ZNF610Q8N9Z0 462 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 CLRN3Q8NCR9 226 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 ARRDC4Q8NCT1 418 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 CLEC4DQ8WXI8 215 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 JDP2Q8WYK2 163 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 YIPF4Q9BSR8 244 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 KLHL14Q9P2G3 628 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 SPEF1Q9Y4P9 236 aa7.33□□□□□ -1.24
CKS1BP1-201ENST00000555221 PRAMEF25A6NGN4 478 aa7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 HRKO00198 91 aa7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 FOXP2O15409 715 aa7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 C4BPAP04003 597 aaKnown RBP7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 CD40P25942 277 aa7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 EPHB1P54762 984 aa7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 HERVK_113P62684 666 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms