RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 BMT2Q1RMZ1 405 aa23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 EPM2AIP1Q7L775 607 aaPredicted RBP23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 TRAPPC11Q7Z392 1133 aa23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 NIM1KQ8IY84 436 aa23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 BAP1Q92560 729 aa23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 ZBED3Q96IU2 234 aaPredicted RBP23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 TANGO6Q9C0B7 1094 aa23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 ZNF277Q9NRM2 450 aaPredicted RBP23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 CEP72Q9P209 647 aa23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 SSU72P8A0A1W2PR75 194 aa23.49■■□□□ 1.35
ARHGEF40-204ENST00000555038 CTAGE15A4D2H0 777 aa23.49■■□□□ 1.35
ARHGEF40-204ENST00000555038 CTAGE8P0CG41 777 aa23.49■■□□□ 1.35
ARHGEF40-204ENST00000555038 GAP43P17677 238 aa23.49■■□□□ 1.35
ARHGEF40-204ENST00000555038 PPP2R5CQ13362 524 aa23.49■■□□□ 1.35
ARHGEF40-204ENST00000555038 KIAA1755Q5JYT7 1200 aa23.49■■□□□ 1.35
ARHGEF40-204ENST00000555038 PAPD7Q5XG87 772 aaKnown RBP23.49■■□□□ 1.35
ARHGEF40-204ENST00000555038 PDXDC1Q6P996 788 aa23.49■■□□□ 1.35
ARHGEF40-204ENST00000555038 CTAGE6Q86UF2 777 aa23.49■■□□□ 1.35
ARHGEF40-204ENST00000555038 CTAGE4Q8IX94 777 aa23.49■■□□□ 1.35
ARHGEF40-204ENST00000555038 EIF2AK1Q9BQI3 630 aaKnown RBP23.49■■□□□ 1.35
ARHGEF40-204ENST00000555038 COL4A5P29400 1685 aa23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 NPHP3-ACAD11A0A0J9YXS1 232 aa23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 CCDC151A5D8V7 595 aa23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 ASNSP08243 561 aa23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 KCNA3P22001 575 aa23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 SETQ01105 290 aaPredicted RBP23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 PABPC4Q13310 644 aaKnown RBP eCLIP23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 MSANTD4Q8NCY6 345 aa23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 SLC5A5Q92911 643 aa23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 PARD6BQ9BYG5 372 aa23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 FGFBP2Q9BYJ0 223 aa23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 VEZTQ9HBM0 779 aa23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 ARHGAP20Q9P2F6 1191 aa23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.48■■□□□ 1.352e-6■□□□□ 9.1
ARHGEF40-204ENST00000555038 ATAD5Q96QE3 1844 aa23.48■■□□□ 1.35
ARHGEF40-204ENST00000555038 PDXKO00764 312 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 MAPK8IP2Q13387 824 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 ADAM9Q13443 819 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 CACNA2D4Q7Z3S7 1137 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 RPGRIP1Q96KN7 1286 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 REEP2Q9BRK0 252 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 TBC1D7Q9P0N9 293 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 FHOD1Q9Y613 1164 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 EPHB6O15197 1021 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 CALUO43852 315 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 PSMD10O75832 226 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 CFBP00751 764 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 DPEP1P16444 411 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 PSMC6P62333 389 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 GABPB1Q06547 395 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 KCNMA1Q12791 1236 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 KNOP1Q1ED39 458 aaKnown RBP23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 CC2D1AQ6P1N0 951 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 RRAGAQ7L523 313 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 OTOP1Q7RTM1 612 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 FRMD5Q7Z6J6 570 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 NELFCDQ8IXH7 590 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 HSD17B14Q9BPX1 270 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 OLFML3Q9NRN5 406 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 GINM1Q9NU53 330 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 TRIM10Q9UDY6 481 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 PGAP2Q9UHJ9 254 aa23.47■■□□□ 1.35
ARHGEF40-204ENST00000555038 LRRC53A6NM62 1247 aa23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 TBCAO75347 108 aaKnown RBP23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 PNMA6AP0CW24 399 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 ZSCAN20P17040 1043 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 KIF11P52732 1056 aa23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 HNRNPLLQ8WVV9 542 aaKnown RBP23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 UIMC1Q96RL1 719 aa23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 WDR11Q9BZH6 1224 aa23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 DEF6Q9H4E7 631 aa23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 ARFGAP3Q9NP61 516 aa23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 PUF60Q9UHX1 559 aaKnown RBP23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 RAB21Q9UL25 225 aa23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 ZBTB12Q9Y330 459 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 SAR1BQ9Y6B6 198 aa23.46■■□□□ 1.35
ARHGEF40-204ENST00000555038 CACNB1Q02641 598 aaPredicted RBP23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 CKAP4Q07065 602 aaKnown RBP23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 LRCH2Q5VUJ6 765 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 TRIM58Q8NG06 486 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 SECISBP2LQ93073 1101 aaKnown RBP23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 ZHX3Q9H4I2 956 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 MEIS1O00470 390 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 PRELPP51888 382 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 CEP55Q53EZ4 464 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 CCDC174Q6PII3 467 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 KRT26Q7Z3Y9 468 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 SFR1Q86XK3 245 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 CYP2W1Q8TAV3 490 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 WDR18Q9BV38 432 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 IFIH1Q9BYX4 1025 aaKnown RBP23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 TMEM39BQ9GZU3 492 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 LACRTQ9GZZ8 138 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 BHMT2Q9H2M3 363 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 TYW1Q9NV66 732 aaKnown RBP23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 KCND2Q9NZV8 630 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 PCDHA13Q9Y5I0 950 aa23.45■■□□□ 1.34
ARHGEF40-204ENST00000555038 EML1O00423 815 aa23.44■■□□□ 1.34
ARHGEF40-204ENST00000555038 SLC16A3O15427 465 aaKnown RBP23.44■■□□□ 1.34
ARHGEF40-204ENST00000555038 AKR1B10O60218 316 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms