RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 AP3B2Q13367 1082 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 NYAP1Q6ZVC0 841 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 EEPD1Q7L9B9 569 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 FERMT2Q96AC1 680 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 PCDHA5Q9Y5H7 936 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 LOC102724159A0A0B4J2E5 919 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 ASB14A6NK59 587 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 ZNF865P0CJ78 1059 aaPredicted RBP19.49■□□□□ 0.71
SHOX-204ENST00000554971 SFPQP23246 707 aaKnown RBP eCLIP19.49■□□□□ 0.71
SHOX-204ENST00000554971 SARSP49591 514 aaKnown RBP19.49■□□□□ 0.71
SHOX-204ENST00000554971 PNOCQ13519 176 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 PWP2Q15269 919 aaKnown RBP19.49■□□□□ 0.71
SHOX-204ENST00000554971 MTFR1Q15390 333 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 PTPN14Q15678 1187 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 VSIG10LQ86VR7 867 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 FBXO16Q8IX29 292 aaPredicted RBP19.49■□□□□ 0.71
SHOX-204ENST00000554971 CCDC112Q8NEF3 446 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 ZNF333Q96JL9 665 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 IWS1Q96ST2 819 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 FAM205CA6NFA0 338 aa19.48■□□□□ 0.71
SHOX-204ENST00000554971 FOSP01100 380 aaPredicted RBP19.48■□□□□ 0.71
SHOX-204ENST00000554971 SREBF1P36956 1147 aa19.48■□□□□ 0.71
SHOX-204ENST00000554971 POSTNQ15063 836 aa19.48■□□□□ 0.71
SHOX-204ENST00000554971 CCAR2Q8N163 923 aaKnown RBP19.48■□□□□ 0.71
SHOX-204ENST00000554971 ARMC5Q96C12 935 aa19.48■□□□□ 0.71
SHOX-204ENST00000554971 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.47■□□□□ 0.71
SHOX-204ENST00000554971 ADCY6O43306 1168 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 CCND3P30281 292 aaPredicted RBP19.47■□□□□ 0.71
SHOX-204ENST00000554971 TRAPPC10P48553 1259 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 TMEM63BQ5T3F8 832 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 MFSD14CQ5VZR4 134 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 CEP135Q66GS9 1140 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 C16orf45Q96MC5 204 aaPredicted RBP19.47■□□□□ 0.71
SHOX-204ENST00000554971 PYM1Q9BRP8 204 aaKnown RBP19.47■□□□□ 0.71
SHOX-204ENST00000554971 PDGFCQ9NRA1 345 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 PDE4DQ08499 809 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 ACVR2BQ13705 512 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 PCNX4Q63HM2 1172 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 TAPT1Q6NXT6 567 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 SPATA20Q8TB22 786 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 HSD3B7Q9H2F3 369 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 ABHD16BQ9H3Z7 469 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 PCDHB6Q9Y5E3 794 aa19.47■□□□□ 0.71
SHOX-204ENST00000554971 MYCP01106 439 aaPredicted RBP19.46■□□□□ 0.71
SHOX-204ENST00000554971 MYCLP12524 364 aaPredicted RBP19.46■□□□□ 0.71
SHOX-204ENST00000554971 UBASH3AP57075 661 aa19.46■□□□□ 0.71
SHOX-204ENST00000554971 TMC6Q7Z403 805 aa19.46■□□□□ 0.71
SHOX-204ENST00000554971 CYP2W1Q8TAV3 490 aa19.46■□□□□ 0.71
SHOX-204ENST00000554971 ENOX1Q8TC92 643 aaKnown RBP19.46■□□□□ 0.71
SHOX-204ENST00000554971 SMARCE1Q969G3 411 aa19.46■□□□□ 0.71
SHOX-204ENST00000554971 ERCC5P28715 1186 aaPredicted RBP19.45■□□□□ 0.7
SHOX-204ENST00000554971 ARHGAP4P98171 946 aa19.45■□□□□ 0.7
SHOX-204ENST00000554971 STXBP2Q15833 593 aa19.45■□□□□ 0.7
SHOX-204ENST00000554971 TBCKQ8TEA7 893 aa19.45■□□□□ 0.7
SHOX-204ENST00000554971 POLR2DO15514 142 aaKnown RBP19.45■□□□□ 0.7
SHOX-204ENST00000554971 SERPINC1P01008 464 aa19.45■□□□□ 0.7
SHOX-204ENST00000554971 MORC3Q14149 939 aa19.45■□□□□ 0.7
SHOX-204ENST00000554971 ARID5BQ14865 1188 aa19.45■□□□□ 0.7
SHOX-204ENST00000554971 PIK3AP1Q6ZUJ8 805 aa19.45■□□□□ 0.7
SHOX-204ENST00000554971 UNC93B1Q9H1C4 597 aa19.45■□□□□ 0.7
SHOX-204ENST00000554971 ZHX1Q9UKY1 873 aaPredicted RBP19.45■□□□□ 0.7
SHOX-204ENST00000554971 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.44■□□□□ 0.7
SHOX-204ENST00000554971 EIF3JO75822 258 aaKnown RBP19.44■□□□□ 0.7
SHOX-204ENST00000554971 ITGB5P18084 799 aa19.44■□□□□ 0.7
SHOX-204ENST00000554971 CCND2P30279 289 aa19.44■□□□□ 0.7
SHOX-204ENST00000554971 ANKRD7Q92527 254 aa19.44■□□□□ 0.7
SHOX-204ENST00000554971 LENG1Q96BZ8 264 aaPredicted RBP19.44■□□□□ 0.7
SHOX-204ENST00000554971 INPP4AQ96PE3 977 aaPredicted RBP19.44■□□□□ 0.7
SHOX-204ENST00000554971 VTA1Q9NP79 307 aa19.44■□□□□ 0.7
SHOX-204ENST00000554971 FAM86B1E9PN63 330 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 WNT7AO00755 349 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 ARIH2O95376 493 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 FAM86B2P0C5J1 330 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 ADCYAP1R1P41586 468 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 SEMA3FQ13275 785 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 INF2Q27J81 1249 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 MCTP2Q6DN12 878 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 PAK6Q9NQU5 681 aaPredicted RBP19.43■□□□□ 0.7
SHOX-204ENST00000554971 MAN1B1Q9UKM7 699 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 ACTN4O43707 911 aaKnown RBP19.43■□□□□ 0.7
SHOX-204ENST00000554971 CYP3A4P08684 503 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 ARMCX5Q6P1M9 558 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 KRT25Q7Z3Z0 450 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 VSTM4Q8IW00 320 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 KIF18AQ8NI77 898 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 MPHOSPH6Q99547 160 aaKnown RBP19.43■□□□□ 0.7
SHOX-204ENST00000554971 SERTAD1Q9UHV2 236 aa19.43■□□□□ 0.7
SHOX-204ENST00000554971 IGLV3-22A0A075B6J6 115 aa19.42■□□□□ 0.7
SHOX-204ENST00000554971 RBM47A0AV96 593 aaKnown RBP19.42■□□□□ 0.7
SHOX-204ENST00000554971 POTEFA5A3E0 1075 aa19.42■□□□□ 0.7
SHOX-204ENST00000554971 SLFN14P0C7P3 912 aa19.42■□□□□ 0.7
SHOX-204ENST00000554971 CCL5P13501 91 aa19.42■□□□□ 0.7
SHOX-204ENST00000554971 NONOQ15233 471 aaKnown RBP eCLIP19.42■□□□□ 0.7
SHOX-204ENST00000554971 GJC2Q5T442 439 aaPredicted RBP19.42■□□□□ 0.7
SHOX-204ENST00000554971 SEPT14Q6ZU15 432 aa19.42■□□□□ 0.7
SHOX-204ENST00000554971 WDR11Q9BZH6 1224 aa19.42■□□□□ 0.7
SHOX-204ENST00000554971 CSRNP2Q9H175 543 aa19.42■□□□□ 0.7
SHOX-204ENST00000554971 HMX1Q9NP08 348 aaPredicted RBP19.42■□□□□ 0.7
SHOX-204ENST00000554971 UBIAD1Q9Y5Z9 338 aa19.42■□□□□ 0.7
SHOX-204ENST00000554971 CCDC194A0A1B0GVG4 234 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms