RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 STK11IPQ8N1F8 1099 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 SLC17A8Q8NDX2 589 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 SEC16BQ96JE7 1060 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 SPATA32Q96LK8 384 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 LRRC3Q9BY71 257 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 EFR3BQ9Y2G0 817 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 MYO3BQ8WXR4 1341 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 TMEM265A0A087WTH1 108 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 PRR33A8MZF0 331 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 ATP2B1P20020 1258 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 SOX9P48436 509 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 NASPP49321 788 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-228ENST00000554592 MPP2Q14168 576 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 SLC4A8Q2Y0W8 1093 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 CCDC152Q4G0S7 254 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 SEZ6Q53EL9 994 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 DACT2Q5SW24 774 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 STRIP1Q5VSL9 837 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 MCATQ8IVS2 390 aaKnown RBP6.25□□□□□ -1.41
ATXN3-228ENST00000554592 ZBTB38Q8NAP3 1195 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-228ENST00000554592 CD99L2Q8TCZ2 262 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 DHX38Q92620 1227 aaKnown RBP6.25□□□□□ -1.41
ATXN3-228ENST00000554592 NKD1Q969G9 470 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 ACSF2Q96CM8 615 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-228ENST00000554592 ZNF333Q96JL9 665 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 TMEM87BQ96K49 555 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATXN3-228ENST00000554592 ADAM30Q9UKF2 790 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 MAPK8IP1Q9UQF2 711 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 CORINQ9Y5Q5 1042 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 SNX11Q9Y5W9 270 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 XDHP47989 1333 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 MAPK8IP3Q9UPT6 1336 aa6.25□□□□□ -1.41
ATXN3-228ENST00000554592 PGRP06401 933 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 ZNF865P0CJ78 1059 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-228ENST00000554592 ITIH2P19823 946 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 FUT4P22083 530 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 RIPK4P57078 832 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 CRHR2Q13324 411 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 SUPT20HL1Q3ZLR7 823 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 SLC6A19Q695T7 634 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 LETMD1Q6P1Q0 360 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 ANKRD18AQ8IVF6 992 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 AGBL5Q8NDL9 886 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 UBXN4Q92575 508 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 ZBED3Q96IU2 234 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-228ENST00000554592 WNK4Q96J92 1243 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 MIPEPQ99797 713 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 DEFB129Q9H1M3 183 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 PRDM5Q9NQX1 630 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-228ENST00000554592 HYPKQ9NX55 129 aa6.24□□□□□ -1.41
ATXN3-228ENST00000554592 DBF4Q9UBU7 674 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-228ENST00000554592 POLR3KQ9Y2Y1 108 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-228ENST00000554592 DUOX1Q9NRD9 1551 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 CHL1O00533 1208 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 PAX4O43316 350 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 PDE8AO60658 829 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 SASH1O94885 1247 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 HOXB7P09629 217 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 GTF2F1P35269 517 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATXN3-228ENST00000554592 LMOD3Q0VAK6 560 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 COL9A2Q14055 689 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-228ENST00000554592 CWF19L2Q2TBE0 894 aaKnown RBP6.23□□□□□ -1.41
ATXN3-228ENST00000554592 SLC9C1Q4G0N8 1177 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 TMEM201Q5SNT2 666 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 TTLL5Q6EMB2 1281 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 REC114Q7Z4M0 266 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 PPP1R13LQ8WUF5 828 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 DPF3Q92784 378 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 HRASLS5Q96KN8 279 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 DPH2Q9BQC3 489 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-228ENST00000554592 MXD3Q9BW11 206 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 COA1Q9GZY4 146 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 BRMS1Q9HCU9 246 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 SEMA3GQ9NS98 782 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 CHPF2Q9P2E5 772 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 ADAMTS6Q9UKP5 1117 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 PPP2R3BQ9Y5P8 575 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 PAPPA2Q9BXP8 1791 aa6.23□□□□□ -1.41
ATXN3-228ENST00000554592 WTIPA6NIX2 430 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-228ENST00000554592 USP2O75604 605 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-228ENST00000554592 WDHD1O75717 1129 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-228ENST00000554592 BPNT1O95861 308 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 PCCAP05165 728 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-228ENST00000554592 ITGB5P18084 799 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 PDE4BQ07343 736 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 DLGAP5Q15398 846 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 ANKRD13AQ8IZ07 590 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 CCDC191Q8NCU4 936 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 DNAJB8Q8NHS0 232 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 CLMNQ96JQ2 1002 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 CDC5LQ99459 802 aaKnown RBP6.22□□□□□ -1.41
ATXN3-228ENST00000554592 PTPN18Q99952 460 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 MBNL3Q9NUK0 354 aaKnown RBP6.22□□□□□ -1.41
ATXN3-228ENST00000554592 PPT2Q9UMR5 302 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 MINPP1Q9UNW1 487 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 FZD1Q9UP38 647 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 PTCH2Q9Y6C5 1203 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 CAPN6Q9Y6Q1 641 aa6.22□□□□□ -1.41
ATXN3-228ENST00000554592 MED23Q9ULK4 1368 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms