RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 COL1A1P02452 1464 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-212ENST00000554486 AK9Q5TCS8 1911 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 SBF1O95248 1867 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 LTBP3Q9NS15 1303 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 GLRX3O76003 335 aaKnown RBP7.62□□□□□ -1.19
SCFD1-212ENST00000554486 FGRP09769 529 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 GSPT1P15170 499 aaKnown RBP7.62□□□□□ -1.19
SCFD1-212ENST00000554486 HIBADHP31937 336 aaKnown RBP7.62□□□□□ -1.19
SCFD1-212ENST00000554486 MCAMP43121 646 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 NASPP49321 788 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-212ENST00000554486 RASGRF1Q13972 1273 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 CAVIN4Q5BKX8 364 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 CCDC158Q5M9N0 1113 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 TTC39AQ5SRH9 613 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 TTC22Q5TAA0 569 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 GK5Q6ZS86 529 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 SHISA5Q8N114 240 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 SUPT20HQ8NEM7 779 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 GATA6Q92908 595 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 SEC16BQ96JE7 1060 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 ZNF512BQ96KM6 892 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-212ENST00000554486 EYA3Q99504 573 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 BOLA2Q9H3K6 86 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 ANTXR1Q9H6X2 564 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 ZNF277Q9NRM2 450 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-212ENST00000554486 REV1Q9UBZ9 1251 aa7.62□□□□□ -1.19
SCFD1-212ENST00000554486 ZNF646O15015 1829 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-212ENST00000554486 DICER1Q9UPY3 1922 aaKnown RBP7.61□□□□□ -1.19
SCFD1-212ENST00000554486 UPK3BL1B0FP48 263 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 UPK3BL2E5RIL1 263 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 ERC2O15083 957 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 RNGTTO60942 597 aaKnown RBP7.61□□□□□ -1.19
SCFD1-212ENST00000554486 F13BP05160 661 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 PGRP06401 933 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 UQCRFS1P1P0C7P4 283 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 IL1R1P14778 569 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 MCM4P33991 863 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 ZNF165P49910 485 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 PRELPP51888 382 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 ETF1P62495 437 aaKnown RBP7.61□□□□□ -1.19
SCFD1-212ENST00000554486 CYP27A1Q02318 531 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 KIAA2012Q0VF49 1180 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 AOC3Q16853 763 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 ZNF804AQ7Z570 1209 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 MCF2L2Q86YR7 1114 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 TDRD7Q8NHU6 1098 aaKnown RBP7.61□□□□□ -1.19
SCFD1-212ENST00000554486 ZNF507Q8TCN5 953 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.61□□□□□ -1.19
SCFD1-212ENST00000554486 EDC3Q96F86 508 aaKnown RBP7.61□□□□□ -1.19
SCFD1-212ENST00000554486 SPATA32Q96LK8 384 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 HAUS7Q99871 368 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 TAOK3Q9H2K8 898 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 PIDD1Q9HB75 910 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 CD209Q9NNX6 404 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 HMG20BQ9P0W2 317 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 PRKAG2Q9UGJ0 569 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 ADAM30Q9UKF2 790 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 ZNRF3Q9ULT6 936 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 PSME4Q14997 1843 aa7.61□□□□□ -1.19
SCFD1-212ENST00000554486 KIAA1324LA8MWY0 1029 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-212ENST00000554486 PPIP5K2O43314 1243 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 MAP4K4O95819 1239 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-212ENST00000554486 PLCG1P19174 1290 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 SDSP20132 328 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 CAP2P40123 477 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 IARSP41252 1262 aaKnown RBP7.6□□□□□ -1.19
SCFD1-212ENST00000554486 COL9A2Q14055 689 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-212ENST00000554486 BMP2KLQ5H9B9 411 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 CCDC81Q6ZN84 652 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 ARHGAP27Q6ZUM4 889 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 ZAR1Q86SH2 424 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 VPS37DQ86XT2 251 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 MCATQ8IVS2 390 aaKnown RBP7.6□□□□□ -1.19
SCFD1-212ENST00000554486 COA1Q9GZY4 146 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 VPS33BQ9H267 617 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 DBNDD1Q9H9R9 158 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 GNL3LQ9NVN8 582 aaKnown RBP7.6□□□□□ -1.19
SCFD1-212ENST00000554486 PCOLCE2Q9UKZ9 415 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 DAGLAQ9Y4D2 1042 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 MYH7P12883 1935 aa7.6□□□□□ -1.19
SCFD1-212ENST00000554486 DOCK2Q92608 1830 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 PDS5AQ29RF7 1337 aaKnown RBP7.59□□□□□ -1.19
SCFD1-212ENST00000554486 FAM205AQ6ZU69 1335 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 SLC22A31A6NKX4 558 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 YDJCA8MPS7 323 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 CHURC1-FNTBB4DL54 471 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 GOLIM4O00461 696 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 ECE2O60344 883 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 MED26O95402 600 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 DNAJA1P31689 397 aaKnown RBP7.59□□□□□ -1.19
SCFD1-212ENST00000554486 ADMP35318 185 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 CHAF1AQ13111 956 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-212ENST00000554486 HID1Q8IV36 788 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 MRPL41Q8IXM3 137 aaKnown RBP7.59□□□□□ -1.19
SCFD1-212ENST00000554486 SPATA5Q8NB90 893 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 SHDQ96IW2 340 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 TMEM87BQ96K49 555 aa7.59□□□□□ -1.19
SCFD1-212ENST00000554486 DNAJC2Q99543 621 aaKnown RBP7.59□□□□□ -1.19
SCFD1-212ENST00000554486 PIH1D3Q9NQM4 214 aaKnown RBP7.59□□□□□ -1.19
SCFD1-212ENST00000554486 PICK1Q9NRD5 415 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms