RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 CDK5RAP3Q96JB5 506 aa18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 BCAS3Q9H6U6 928 aa18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 RNF14Q9UBS8 474 aa18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 F8W031 263 aaPredicted RBP18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 PJA2O43164 708 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 MGRN1O60291 552 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 SKAP2O75563 359 aaPredicted RBP18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 LDHBP07195 334 aaKnown RBP18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 POLR2FP61218 127 aaKnown RBP18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 PICALMQ13492 652 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 HLTFQ14527 1009 aaKnown RBP eCLIP18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 ACCSLQ4AC99 568 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 NEK8Q86SG6 692 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 ZSCAN29Q8IWY8 852 aaPredicted RBP18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 TBC1D31Q96DN5 1066 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 CEP95Q96GE4 821 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 PNMA5Q96PV4 448 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 PLCB1Q9NQ66 1216 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 SLC16A2P36021 539 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 HSD17B3P37058 310 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 LACTB2Q53H82 288 aaPredicted RBP18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 ODF2Q5BJF6 829 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 FAM114A1Q8IWE2 563 aa18.56■□□□□ 0.56
PPP4R3A-202ENST00000554390 TRAF5O00463 557 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 RAD51CO43502 376 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 SV2BQ7L1I2 683 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 DDX42Q86XP3 938 aaKnown RBP eCLIP18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 SNX29Q8TEQ0 813 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 DDX12PQ92771 950 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 HVCN1Q96D96 273 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 EYA3Q99504 573 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 ADAMTS1Q9UHI8 967 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 TSKSQ9UJT2 592 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 BICDL2A1A5D9 508 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 PALMO75781 387 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 BRD2P25440 801 aaKnown RBP18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 SOGA3Q5TF21 947 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 RAPGEF5Q92565 580 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 NLRP3Q96P20 1036 aa18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 CNOT8Q9UFF9 292 aaKnown RBP18.55■□□□□ 0.56
PPP4R3A-202ENST00000554390 TLR2O60603 784 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 ACTN1P12814 892 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 TAL1P17542 331 aaPredicted RBP18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 KLRC1P26715 233 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 RAPGEF1Q13905 1077 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 LRIG3Q6UXM1 1119 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 DGKHQ86XP1 1220 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 TBC1D5Q92609 795 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 CCDC47Q96A33 483 aaKnown RBP18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 CALML4Q96GE6 196 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 BAIAP2L1Q9UHR4 511 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 DOT1LQ8TEK3 1739 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 C5orf60A6NFR6 353 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 H0YGN5 161 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 KCNMA1Q12791 1236 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 DHX37Q8IY37 1157 aaKnown RBP18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 FAM133AQ8N9E0 248 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 CCT6BQ92526 530 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 NOD2Q9HC29 1040 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 ZNF652Q9Y2D9 606 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 NFS1Q9Y697 457 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 A0A1B0GUL6 1792 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 PHLPP1O60346 1717 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 PALM3A6NDB9 673 aaPredicted RBP18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 PHF20L1A8MW92 1017 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 ATP6V1G2O95670 118 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 ELF3P78545 371 aaPredicted RBP18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 ZNF844Q08AG5 666 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 UAP1Q16222 522 aaPredicted RBP18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 CALCRLQ16602 461 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 MSL1Q68DK7 614 aa18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 LARP4BQ92615 738 aaKnown RBP18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 TAF1DQ9H5J8 278 aaPredicted RBP18.54■□□□□ 0.56
PPP4R3A-202ENST00000554390 MARCH6O60337 910 aa18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 CTNNA1P35221 906 aaKnown RBP18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 CCNHP51946 323 aaPredicted RBP18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 SF3B3Q15393 1217 aaKnown RBP18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 GKAP1Q5VSY0 366 aaPredicted RBP18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 HIBCHQ6NVY1 386 aaPredicted RBP18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 SLC30A10Q6XR72 485 aa18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 REXO1Q8N1G1 1221 aaKnown RBP18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 RNF10Q8N5U6 811 aaKnown RBP18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 BAP1Q92560 729 aa18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 TATDN2Q93075 761 aa18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 RSRC1Q96IZ7 334 aaKnown RBP18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 E9PMD0 336 aa18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 EDIL3O43854 480 aa18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 DNAJC8O75937 253 aaPredicted RBP18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 PPP2R2AP63151 447 aa18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 CNNM4Q6P4Q7 775 aa18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 CPLX4Q7Z7G2 160 aa18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 LSM14BQ9BX40 385 aaKnown RBP18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 IKZF4Q9H2S9 585 aa18.53■□□□□ 0.56
PPP4R3A-202ENST00000554390 CDK8P49336 464 aa18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 NBPF9Q3BBW0 867 aa18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 TTBK2Q6IQ55 1244 aa18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 CEP120Q8N960 986 aa18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 C7orf25Q9BPX7 421 aa18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 NOVA2Q9UNW9 492 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms