RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 TNNI2P48788 182 aa7.26□□□□□ -1.25
ATXN3-226ENST00000554350 NHLH1Q02575 133 aa7.26□□□□□ -1.25
ATXN3-226ENST00000554350 ATG4DQ86TL0 474 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-226ENST00000554350 LRRN4CLQ8ND94 238 aa7.26□□□□□ -1.25
ATXN3-226ENST00000554350 GRIN3AQ8TCU5 1115 aa7.26□□□□□ -1.25
ATXN3-226ENST00000554350 SENP6Q9GZR1 1112 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-226ENST00000554350 ZNF70Q9UC06 446 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-226ENST00000554350 OGDHLQ9ULD0 1010 aa7.26□□□□□ -1.25
ATXN3-226ENST00000554350 CACNA1GO43497 2377 aa7.25□□□□□ -1.25
ATXN3-226ENST00000554350 KCNJ4P48050 445 aa7.25□□□□□ -1.25
ATXN3-226ENST00000554350 CCT4P50991 539 aaKnown RBP7.25□□□□□ -1.25
ATXN3-226ENST00000554350 AKNAD1Q5T1N1 836 aa7.25□□□□□ -1.25
ATXN3-226ENST00000554350 SMCR8Q8TEV9 937 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-226ENST00000554350 BADQ92934 168 aa7.25□□□□□ -1.25
ATXN3-226ENST00000554350 PRDM12Q9H4Q4 367 aa7.25□□□□□ -1.25
ATXN3-226ENST00000554350 TDRD3Q9H7E2 651 aaKnown RBP7.25□□□□□ -1.25
ATXN3-226ENST00000554350 RC3H2Q9HBD1 1191 aaKnown RBP7.25□□□□□ -1.25
ATXN3-226ENST00000554350 PPP4R2Q9NY27 417 aa7.25□□□□□ -1.25
ATXN3-226ENST00000554350 ATP11BQ9Y2G3 1177 aa7.25□□□□□ -1.25
ATXN3-226ENST00000554350 COL6A1P12109 1028 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 HSP90B1P14625 803 aaKnown RBP7.24□□□□□ -1.25
ATXN3-226ENST00000554350 KCNQ1P51787 676 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 TFF2Q03403 129 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 PPATQ06203 517 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 AAK1Q2M2I8 961 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 PPM1JQ5JR12 505 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 ZNF648Q5T619 568 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-226ENST00000554350 GADL1Q6ZQY3 521 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 LRP10Q7Z4F1 713 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 CERS5Q8N5B7 392 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 TIFAQ96CG3 184 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 HRASLS5Q96KN8 279 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 TEPSINQ96N21 525 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 OSBPL7Q9BZF2 842 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 JAG2Q9Y219 1238 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 MYO9BQ13459 2157 aa7.24□□□□□ -1.25
ATXN3-226ENST00000554350 CDH23Q9H251 3354 aa7.23□□□□□ -1.25
ATXN3-226ENST00000554350 CCER2I3L3R5 266 aa7.23□□□□□ -1.25
ATXN3-226ENST00000554350 HTATSF1O43719 755 aaKnown RBP7.23□□□□□ -1.25
ATXN3-226ENST00000554350 KLRK1P26718 216 aa7.23□□□□□ -1.25
ATXN3-226ENST00000554350 RTP1P59025 263 aa7.23□□□□□ -1.25
ATXN3-226ENST00000554350 PLCB3Q01970 1234 aa7.23□□□□□ -1.25
ATXN3-226ENST00000554350 CCDC129Q6ZRS4 1044 aa7.23□□□□□ -1.25
ATXN3-226ENST00000554350 ANKRD13CQ8N6S4 541 aa7.23□□□□□ -1.25
ATXN3-226ENST00000554350 CDC5LQ99459 802 aaKnown RBP7.23□□□□□ -1.25
ATXN3-226ENST00000554350 EMILIN2Q9BXX0 1053 aa7.23□□□□□ -1.25
ATXN3-226ENST00000554350 MINPP1Q9UNW1 487 aa7.23□□□□□ -1.25
ATXN3-226ENST00000554350 BIN1O00499 593 aa7.22□□□□□ -1.25
ATXN3-226ENST00000554350 FBXO24O75426 580 aa7.22□□□□□ -1.25
ATXN3-226ENST00000554350 ITIH2P19823 946 aa7.22□□□□□ -1.25
ATXN3-226ENST00000554350 HNRNPUQ00839 825 aaKnown RBP eCLIP7.22□□□□□ -1.25
ATXN3-226ENST00000554350 CC2D1BQ5T0F9 858 aaKnown RBP7.22□□□□□ -1.25
ATXN3-226ENST00000554350 DCAF15Q66K64 600 aa7.22□□□□□ -1.25
ATXN3-226ENST00000554350 SPACA3Q8IXA5 215 aa7.22□□□□□ -1.25
ATXN3-226ENST00000554350 JARID2Q92833 1246 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-226ENST00000554350 HOOK2Q96ED9 719 aa7.22□□□□□ -1.25
ATXN3-226ENST00000554350 KRTAP4-7Q9BYR0 210 aa7.22□□□□□ -1.25
ATXN3-226ENST00000554350 DOCK3Q8IZD9 2030 aa7.22□□□□□ -1.25
ATXN3-226ENST00000554350 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-226ENST00000554350 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-226ENST00000554350 DCDC2CA8MYV0 355 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 PDE8AO60658 829 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 CYP2B6P20813 491 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 MAPK1P28482 360 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 CACNB3P54284 484 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 NKPD1Q17RQ9 610 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 ZBTB37Q5TC79 503 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 MIGA2Q7L4E1 593 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 C12orf40Q86WS4 652 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 PLBD2Q8NHP8 589 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 PI4K2BQ8TCG2 481 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 TRIB2Q92519 343 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 FAM168AQ92567 244 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 ISCA1Q9BUE6 129 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 ZNF341Q9BYN7 854 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 CBX8Q9HC52 389 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 CD209Q9NNX6 404 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 SSU72Q9NP77 194 aaKnown RBP7.21□□□□□ -1.26
ATXN3-226ENST00000554350 PRDM7Q9NQW5 492 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 TSPYL4Q9UJ04 414 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 SNX11Q9Y5W9 270 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 LTBP2Q14767 1821 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 SPEF2Q9C093 1822 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 ZDBF2Q9HCK1 2354 aa7.21□□□□□ -1.26
ATXN3-226ENST00000554350 COL3A1P02461 1466 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-226ENST00000554350 PRR33A8MZF0 331 aa7.2□□□□□ -1.26
ATXN3-226ENST00000554350 EOMESO95936 686 aa7.2□□□□□ -1.26
ATXN3-226ENST00000554350 CCND3P30281 292 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-226ENST00000554350 GSTT1P30711 240 aa7.2□□□□□ -1.26
ATXN3-226ENST00000554350 PDE4CQ08493 712 aa7.2□□□□□ -1.26
ATXN3-226ENST00000554350 MOGSQ13724 837 aa7.2□□□□□ -1.26
ATXN3-226ENST00000554350 FASTKD5Q7L8L6 764 aaKnown RBP7.2□□□□□ -1.26
ATXN3-226ENST00000554350 TMOD2Q9NZR1 351 aa7.2□□□□□ -1.26
ATXN3-226ENST00000554350 PPM1HQ9ULR3 514 aa7.2□□□□□ -1.26
ATXN3-226ENST00000554350 TTF2Q9UNY4 1162 aaKnown RBP7.2□□□□□ -1.26
ATXN3-226ENST00000554350 NUDCQ9Y266 331 aa7.2□□□□□ -1.26
ATXN3-226ENST00000554350 ARAP2Q8WZ64 1704 aa7.2□□□□□ -1.26
ATXN3-226ENST00000554350 MAST2Q6P0Q8 1798 aa7.2□□□□□ -1.26
ATXN3-226ENST00000554350 BRD1O95696 1058 aa7.19□□□□□ -1.26
ATXN3-226ENST00000554350 ZKSCAN1P17029 563 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms