RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 C22orf23Q9BZE7 217 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 AGO4Q9HCK5 861 aaKnown RBP14.87□□□□□ -0.03
SHMT2-211ENST00000554310 SLC9A2Q9UBY0 812 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 PCDHA4Q9UN74 947 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 KAT6AQ92794 2004 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 IGLV3-22A0A075B6J6 115 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 FAM86B1E9PN63 330 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 ADAMTS3O15072 1205 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 PARNO95453 639 aaKnown RBP14.86□□□□□ -0.03
SHMT2-211ENST00000554310 FGBP02675 491 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 FAM86B2P0C5J1 330 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 IQCF3P0C7M6 154 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 ARP10275 920 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 GNAT1P11488 350 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 SELPP16109 830 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 NEK4P51957 841 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 ITGB3BPQ13352 177 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-211ENST00000554310 FAM109BQ6ICB4 259 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-211ENST00000554310 LRRC8DQ7L1W4 858 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 SERINC5Q86VE9 423 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 PLA2G4DQ86XP0 818 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 RASGRP4Q8TDF6 673 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 TBC1D32Q96NH3 1257 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 ERAP1Q9NZ08 941 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 TELO2Q9Y4R8 837 aa14.86□□□□□ -0.03
SHMT2-211ENST00000554310 LAMA2P24043 3122 aaKnown RBP14.85□□□□□ -0.03
SHMT2-211ENST00000554310 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-211ENST00000554310 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-211ENST00000554310 GSTTP1A0A1W2PQM5 241 aa14.85□□□□□ -0.03
SHMT2-211ENST00000554310 XBP1P17861 261 aa14.85□□□□□ -0.03
SHMT2-211ENST00000554310 CIITAP33076 1130 aa14.85□□□□□ -0.03
SHMT2-211ENST00000554310 DEFB123Q8N688 67 aa14.85□□□□□ -0.03
SHMT2-211ENST00000554310 WASF1Q92558 559 aa14.85□□□□□ -0.03
SHMT2-211ENST00000554310 GTF3C6Q969F1 213 aa14.85□□□□□ -0.03
SHMT2-211ENST00000554310 SMARCAD1Q9H4L7 1026 aa14.85□□□□□ -0.03
SHMT2-211ENST00000554310 NRCAMQ92823 1304 aa14.85□□□□□ -0.03
SHMT2-211ENST00000554310 TET1Q8NFU7 2136 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 TMEM265A0A087WTH1 108 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 CAND2O75155 1236 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 LGR5O75473 907 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 CKBP12277 381 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 ACTN1P12814 892 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 ACTR2P61160 394 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 ZNF200P98182 395 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-211ENST00000554310 HIC1Q14526 733 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 TRIM71Q2Q1W2 868 aaKnown RBP14.84□□□□□ -0.03
SHMT2-211ENST00000554310 ZNF697Q5TEC3 545 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 OTOP2Q7RTS6 562 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 DEFB128Q7Z7B8 93 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 BLIDQ8IZY5 108 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 LMBR1Q8WVP7 490 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 GLG1Q92896 1179 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 ATP6V0A1Q93050 837 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 VWCEQ96DN2 955 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 RNPEPQ9H4A4 650 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 AZI2Q9H6S1 392 aa14.84□□□□□ -0.03
SHMT2-211ENST00000554310 GBF1Q92538 1859 aa14.83□□□□□ -0.04
SHMT2-211ENST00000554310 IPO5O00410 1097 aaKnown RBP14.83□□□□□ -0.04
SHMT2-211ENST00000554310 USP11P51784 963 aa14.83□□□□□ -0.04
SHMT2-211ENST00000554310 PPFIA1Q13136 1202 aa14.83□□□□□ -0.04
SHMT2-211ENST00000554310 NPY5RQ15761 445 aa14.83□□□□□ -0.04
SHMT2-211ENST00000554310 ME3Q16798 604 aa14.83□□□□□ -0.04
SHMT2-211ENST00000554310 PRR16Q569H4 304 aa14.83□□□□□ -0.04
SHMT2-211ENST00000554310 WNT8BQ93098 351 aa14.83□□□□□ -0.04
SHMT2-211ENST00000554310 AIFM3Q96NN9 605 aa14.83□□□□□ -0.04
SHMT2-211ENST00000554310 ZNF577Q9BSK1 485 aa14.83□□□□□ -0.04
SHMT2-211ENST00000554310 TBC1D22BQ9NU19 505 aa14.83□□□□□ -0.04
SHMT2-211ENST00000554310 SETD4Q9NVD3 440 aa14.83□□□□□ -0.04
SHMT2-211ENST00000554310 CXXC1Q9P0U4 656 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-211ENST00000554310 TCEAL9Q9UHQ7 104 aa14.83□□□□□ -0.04
SHMT2-211ENST00000554310 M0R2N6 131 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 TREHO43280 583 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 BAIAP3O94812 1187 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 LARGE1O95461 756 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 CTDNEP1O95476 244 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 CXCL10P02778 98 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 DNAJB2P25686 324 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 SLC26A2P50443 739 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 ADAM17P78536 824 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 TRAF7Q6Q0C0 670 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 Q7L0L9 218 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 PLPPR4Q7Z2D5 763 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 KRT25Q7Z3Z0 450 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 TNPO1Q92973 898 aaKnown RBP14.82□□□□□ -0.04
SHMT2-211ENST00000554310 LENG9Q96B70 501 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 PCYT2Q99447 389 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 PHF20Q9BVI0 1012 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 FTOQ9C0B1 505 aaKnown RBP eCLIP14.82□□□□□ -0.04
SHMT2-211ENST00000554310 ORC3Q9UBD5 711 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-211ENST00000554310 SLC4A7Q9Y6M7 1214 aa14.82□□□□□ -0.04
SHMT2-211ENST00000554310 ZBBXA8MT70 800 aa14.81□□□□□ -0.04
SHMT2-211ENST00000554310 DDX39AO00148 427 aaKnown RBP14.81□□□□□ -0.04
SHMT2-211ENST00000554310 DHX15O43143 795 aaKnown RBP14.81□□□□□ -0.04
SHMT2-211ENST00000554310 ATG7O95352 703 aa14.81□□□□□ -0.04
SHMT2-211ENST00000554310 CCNE2O96020 404 aa14.81□□□□□ -0.04
SHMT2-211ENST00000554310 MARK3P27448 753 aa14.81□□□□□ -0.04
SHMT2-211ENST00000554310 THPOP40225 353 aa14.81□□□□□ -0.04
SHMT2-211ENST00000554310 RBM25P49756 843 aaKnown RBP14.81□□□□□ -0.04
SHMT2-211ENST00000554310 KRT76Q01546 638 aa14.81□□□□□ -0.04
SHMT2-211ENST00000554310 NONOQ15233 471 aaKnown RBP eCLIP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms