RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 GPR179Q6PRD1 2367 aa19.76■□□□□ 0.75
NEK9-204ENST00000554258 C17orf102A2RUQ5 167 aa19.75■□□□□ 0.75
NEK9-204ENST00000554258 GSG1L2A8MUP6 293 aa19.75■□□□□ 0.75
NEK9-204ENST00000554258 CAND2O75155 1236 aa19.75■□□□□ 0.75
NEK9-204ENST00000554258 AOC1P19801 751 aa19.75■□□□□ 0.75
NEK9-204ENST00000554258 PDE1AP54750 535 aa19.75■□□□□ 0.75
NEK9-204ENST00000554258 CCDC96Q2M329 555 aa19.75■□□□□ 0.75
NEK9-204ENST00000554258 GIMAP6Q6P9H5 292 aa19.75■□□□□ 0.75
NEK9-204ENST00000554258 DTWD2Q8NBA8 298 aa19.75■□□□□ 0.75
NEK9-204ENST00000554258 EMID1Q96A84 441 aaPredicted RBP19.75■□□□□ 0.75
NEK9-204ENST00000554258 APOL5Q9BWW9 433 aa19.75■□□□□ 0.75
NEK9-204ENST00000554258 S1PR5Q9H228 398 aa19.75■□□□□ 0.75
NEK9-204ENST00000554258 R4GN57 208 aa19.75■□□□□ 0.75
NEK9-204ENST00000554258 PI15O43692 258 aa19.74■□□□□ 0.75
NEK9-204ENST00000554258 MX1P20591 662 aa19.74■□□□□ 0.75
NEK9-204ENST00000554258 SLC16A2P36021 539 aa19.74■□□□□ 0.75
NEK9-204ENST00000554258 LAMC2Q13753 1193 aa19.74■□□□□ 0.75
NEK9-204ENST00000554258 PI4K2BQ8TCG2 481 aa19.74■□□□□ 0.75
NEK9-204ENST00000554258 CHAMP1Q96JM3 812 aa19.74■□□□□ 0.75
NEK9-204ENST00000554258 STRBPQ96SI9 672 aaKnown RBP19.74■□□□□ 0.75
NEK9-204ENST00000554258 STX8Q9UNK0 236 aa19.74■□□□□ 0.75
NEK9-204ENST00000554258 FANCMQ8IYD8 2048 aa19.73■□□□□ 0.75
NEK9-204ENST00000554258 DGKIO75912 1065 aa19.73■□□□□ 0.75
NEK9-204ENST00000554258 TECP42680 631 aa19.73■□□□□ 0.75
NEK9-204ENST00000554258 TFAP4Q01664 338 aa19.73■□□□□ 0.75
NEK9-204ENST00000554258 KIAA0319Q5VV43 1072 aa19.73■□□□□ 0.75
NEK9-204ENST00000554258 DCLK2Q8N568 766 aa19.73■□□□□ 0.75
NEK9-204ENST00000554258 COL26A1Q96A83 441 aa19.73■□□□□ 0.75
NEK9-204ENST00000554258 CDCA3Q99618 268 aaPredicted RBP19.73■□□□□ 0.75
NEK9-204ENST00000554258 BOLA2Q9H3K6 86 aa19.73■□□□□ 0.75
NEK9-204ENST00000554258 DDX41Q9UJV9 622 aaKnown RBP19.73■□□□□ 0.75
NEK9-204ENST00000554258 C2CD4DB7Z1M9 353 aa19.72■□□□□ 0.75
NEK9-204ENST00000554258 TREHO43280 583 aa19.72■□□□□ 0.75
NEK9-204ENST00000554258 PPFIA3O75145 1194 aa19.72■□□□□ 0.75
NEK9-204ENST00000554258 ASGR2P07307 311 aa19.72■□□□□ 0.75
NEK9-204ENST00000554258 TDO2P48775 406 aa19.72■□□□□ 0.75
NEK9-204ENST00000554258 DUSP6Q16828 381 aa19.72■□□□□ 0.75
NEK9-204ENST00000554258 PPP4R3BQ5MIZ7 849 aa19.72■□□□□ 0.75
NEK9-204ENST00000554258 SYDE2Q5VT97 1194 aa19.72■□□□□ 0.75
NEK9-204ENST00000554258 ZSCAN25Q6NSZ9 544 aa19.72■□□□□ 0.75
NEK9-204ENST00000554258 ANKRD54Q6NXT1 300 aa19.72■□□□□ 0.75
NEK9-204ENST00000554258 GPATCH3Q96I76 525 aa19.72■□□□□ 0.75
NEK9-204ENST00000554258 BCL11AQ9H165 835 aa19.72■□□□□ 0.75
NEK9-204ENST00000554258 KAT6AQ92794 2004 aa19.71■□□□□ 0.75
NEK9-204ENST00000554258 PPFIA4O75335 1185 aa19.71■□□□□ 0.75
NEK9-204ENST00000554258 SDHBP21912 280 aa19.71■□□□□ 0.75
NEK9-204ENST00000554258 ACAP1Q15027 740 aa19.71■□□□□ 0.75
NEK9-204ENST00000554258 TTBK2Q6IQ55 1244 aa19.71■□□□□ 0.75
NEK9-204ENST00000554258 CMTR2Q8IYT2 770 aaKnown RBP19.71■□□□□ 0.75
NEK9-204ENST00000554258 RTP3Q9BQQ7 232 aa19.71■□□□□ 0.75
NEK9-204ENST00000554258 PNMA2Q9UL42 364 aa19.71■□□□□ 0.75
NEK9-204ENST00000554258 ENPP3O14638 875 aa19.7■□□□□ 0.74
NEK9-204ENST00000554258 HOXD8P13378 290 aaPredicted RBP19.7■□□□□ 0.74
NEK9-204ENST00000554258 STXBP2Q15833 593 aa19.7■□□□□ 0.74
NEK9-204ENST00000554258 SYCE2Q6PIF2 218 aa19.7■□□□□ 0.74
NEK9-204ENST00000554258 MRVI1Q9Y6F6 885 aa19.7■□□□□ 0.74
NEK9-204ENST00000554258 SMIM10L2AP0DMW4 78 aa19.69■□□□□ 0.74
NEK9-204ENST00000554258 SMIM10L2BP0DMW5 78 aa19.69■□□□□ 0.74
NEK9-204ENST00000554258 ARP10275 920 aa19.69■□□□□ 0.74
NEK9-204ENST00000554258 PAN2Q504Q3 1202 aaKnown RBP19.69■□□□□ 0.74
NEK9-204ENST00000554258 ZC3H14Q6PJT7 736 aaKnown RBP19.69■□□□□ 0.74
NEK9-204ENST00000554258 BTNL9Q6UXG8 535 aa19.69■□□□□ 0.74
NEK9-204ENST00000554258 TMEM184AQ6ZMB5 413 aa19.69■□□□□ 0.74
NEK9-204ENST00000554258 DCAF4Q8WV16 495 aa19.69■□□□□ 0.74
NEK9-204ENST00000554258 ZFYVE26Q68DK2 2539 aa19.68■□□□□ 0.74
NEK9-204ENST00000554258 GHRP10912 638 aa19.68■□□□□ 0.74
NEK9-204ENST00000554258 NPR3P17342 541 aa19.68■□□□□ 0.74
NEK9-204ENST00000554258 HOXC8P31273 242 aa19.68■□□□□ 0.74
NEK9-204ENST00000554258 ATXN1P54253 815 aaKnown RBP19.68■□□□□ 0.74
NEK9-204ENST00000554258 FAM26DQ5JW98 314 aa19.68■□□□□ 0.74
NEK9-204ENST00000554258 TSHZ3Q63HK5 1081 aa19.68■□□□□ 0.74
NEK9-204ENST00000554258 NSUN6Q8TEA1 469 aaKnown RBP19.68■□□□□ 0.74
NEK9-204ENST00000554258 EPB41L4AQ9HCS5 686 aaPredicted RBP19.68■□□□□ 0.74
NEK9-204ENST00000554258 CDH22Q9UJ99 828 aa19.68■□□□□ 0.74
NEK9-204ENST00000554258 APPP05067 770 aa19.67■□□□□ 0.74
NEK9-204ENST00000554258 HOXB8P17481 243 aaPredicted RBP19.67■□□□□ 0.74
NEK9-204ENST00000554258 UBE3AQ05086 875 aa19.67■□□□□ 0.74
NEK9-204ENST00000554258 LLGL2Q6P1M3 1020 aa19.67■□□□□ 0.74
NEK9-204ENST00000554258 SPATA33Q96N06 139 aa19.67■□□□□ 0.74
NEK9-204ENST00000554258 NECTIN4Q96NY8 510 aa19.67■□□□□ 0.74
NEK9-204ENST00000554258 C16orf70Q9BSU1 422 aa19.67■□□□□ 0.74
NEK9-204ENST00000554258 RNPEPQ9H4A4 650 aa19.67■□□□□ 0.74
NEK9-204ENST00000554258 POMKQ9H5K3 350 aa19.67■□□□□ 0.74
NEK9-204ENST00000554258 LIMD1Q9UGP4 676 aa19.67■□□□□ 0.74
NEK9-204ENST00000554258 SETXQ7Z333 2677 aaKnown RBP19.66■□□□□ 0.74
NEK9-204ENST00000554258 H3BRB1 525 aa19.66■□□□□ 0.74
NEK9-204ENST00000554258 SORBS3O60504 671 aa19.66■□□□□ 0.74
NEK9-204ENST00000554258 HSDL1Q3SXM5 330 aa19.66■□□□□ 0.74
NEK9-204ENST00000554258 CES5AQ6NT32 575 aa19.66■□□□□ 0.74
NEK9-204ENST00000554258 SKAP1Q86WV1 359 aa19.66■□□□□ 0.74
NEK9-204ENST00000554258 TDRD5Q8NAT2 981 aaKnown RBP19.66■□□□□ 0.74
NEK9-204ENST00000554258 RIN2Q8WYP3 895 aaPredicted RBP19.66■□□□□ 0.74
NEK9-204ENST00000554258 IWS1Q96ST2 819 aa19.66■□□□□ 0.74
NEK9-204ENST00000554258 TUT1Q9H6E5 874 aaKnown RBP19.66■□□□□ 0.74
NEK9-204ENST00000554258 GPCPD1Q9NPB8 672 aa19.66■□□□□ 0.74
NEK9-204ENST00000554258 NMT2O60551 498 aa19.65■□□□□ 0.74
NEK9-204ENST00000554258 SLC3A2P08195 630 aaKnown RBP19.65■□□□□ 0.74
NEK9-204ENST00000554258 GNAT1P11488 350 aa19.65■□□□□ 0.74
NEK9-204ENST00000554258 KCNC3Q14003 757 aa19.65■□□□□ 0.74
NEK9-204ENST00000554258 MYSM1Q5VVJ2 828 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms