RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ANKLE1Q8NAG6 615 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 CFAP61Q8NHU2 1237 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 DHTKD1Q96HY7 919 aaPredicted RBP10.41□□□□□ -0.74
SIX4-202ENST00000554079 HIC2Q96JB3 615 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 FAM114A2Q9NRY5 505 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 IQSEC3Q9UPP2 1182 aaPredicted RBP10.41□□□□□ -0.74
SIX4-202ENST00000554079 CHMP2BQ9UQN3 213 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 TMED5Q9Y3A6 229 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 PDS5AQ29RF7 1337 aaKnown RBP10.4□□□□□ -0.74
SIX4-202ENST00000554079 O00370 1275 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 RASA1P20936 1047 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 MLH1P40692 756 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 HDAC4P56524 1084 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 GPSM2P81274 684 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 MIGA2Q7L4E1 593 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 KRT26Q7Z3Y9 468 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 ZNF579Q8NAF0 562 aaKnown RBP10.4□□□□□ -0.74
SIX4-202ENST00000554079 ERMNQ8TAM6 284 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 RSPH1Q8WYR4 309 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 ALG1Q9BT22 464 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 CCDC28BQ9BUN5 200 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 DSCC1Q9BVC3 393 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 CDK19Q9BWU1 502 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 RXFP1Q9HBX9 757 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 DDX25Q9UHL0 483 aaKnown RBP10.4□□□□□ -0.74
SIX4-202ENST00000554079 RWDD2AQ9UIY3 292 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 PTPRUQ92729 1446 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 KDM3BQ7LBC6 1761 aa10.4□□□□□ -0.74
SIX4-202ENST00000554079 A0A087X0B3 334 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 KLF18A0A0U1RQI7 1052 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 CASP1P29466 404 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 FLT3P36888 993 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 SH3BGRP55822 239 aaPredicted RBP10.4□□□□□ -0.75
SIX4-202ENST00000554079 OCRLQ01968 901 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 RASSF7Q02833 373 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 CTDSPL2Q05D32 466 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 DHX9Q08211 1270 aaKnown RBP10.4□□□□□ -0.75
SIX4-202ENST00000554079 TEFQ10587 303 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 HLTFQ14527 1009 aaKnown RBP eCLIP10.4□□□□□ -0.75
SIX4-202ENST00000554079 DDB1Q16531 1140 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 CLPPQ16740 277 aaPredicted RBP10.4□□□□□ -0.75
SIX4-202ENST00000554079 RAB11FIP4Q86YS3 637 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 FITM2Q8N6M3 262 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 FAM13CQ8NE31 585 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 TBC1D16Q8TBP0 767 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 WDR60Q8WVS4 1066 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 UBLCP1Q8WVY7 318 aaPredicted RBP10.4□□□□□ -0.75
SIX4-202ENST00000554079 CLMNQ96JQ2 1002 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 INPP4AQ96PE3 977 aaPredicted RBP10.4□□□□□ -0.75
SIX4-202ENST00000554079 NUDCD1Q96RS6 583 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 AGPAT5Q9NUQ2 364 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 SALL4Q9UJQ4 1053 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 INTUQ9ULD6 942 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 EFR3BQ9Y2G0 817 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 PCDHA13Q9Y5I0 950 aa10.4□□□□□ -0.75
SIX4-202ENST00000554079 STK36Q9NRP7 1315 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 NUTM2BA6NNL0 878 aaPredicted RBP10.39□□□□□ -0.75
SIX4-202ENST00000554079 NUTM2EB1AL46 878 aaPredicted RBP10.39□□□□□ -0.75
SIX4-202ENST00000554079 ECE2O60344 883 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 HNRNPCP07910 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
SIX4-202ENST00000554079 HARSP12081 509 aaKnown RBP10.39□□□□□ -0.75
SIX4-202ENST00000554079 VHLP40337 213 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 HSPA2P54652 639 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 RNASELQ05823 741 aaKnown RBP10.39□□□□□ -0.75
SIX4-202ENST00000554079 WASHC2DQ5SRD0 308 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 RASIP1Q5U651 963 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 USP49Q70CQ1 688 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 TMC3Q7Z5M5 1100 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 IRF2BP1Q8IU81 584 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 RETREG2Q8NC44 543 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 GSDMAQ96QA5 445 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 MPHOSPH6Q99547 160 aaKnown RBP10.39□□□□□ -0.75
SIX4-202ENST00000554079 PRMT1Q99873 361 aaKnown RBP10.39□□□□□ -0.75
SIX4-202ENST00000554079 PPP1R12CQ9BZL4 782 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 LRMDAQ9H2I8 198 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 DPH5Q9H2P9 285 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 DDX21Q9NR30 783 aaKnown RBP eCLIP10.39□□□□□ -0.75
SIX4-202ENST00000554079 ZNHIT6Q9NWK9 470 aaKnown RBP10.39□□□□□ -0.75
SIX4-202ENST00000554079 PRKAG3Q9UGI9 489 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 TMEM59LQ9UK28 342 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 DAAM1Q9Y4D1 1078 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 CD2APQ9Y5K6 639 aa10.39□□□□□ -0.75
SIX4-202ENST00000554079 LAMB4A4D0S4 1761 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 TMEM247A6NEH6 219 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 PJA2O43164 708 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 RAD21O60216 631 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 SUN1O94901 812 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 UNC5CO95185 931 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 LCA5LO95447 670 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 AFPP02771 609 aaKnown RBP10.38□□□□□ -0.75
SIX4-202ENST00000554079 TOB1P50616 345 aaPredicted RBP10.38□□□□□ -0.75
SIX4-202ENST00000554079 PDE6CP51160 858 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 SESN3P58005 492 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 TAF7Q15545 349 aaPredicted RBP10.38□□□□□ -0.75
SIX4-202ENST00000554079 TMEM132AQ24JP5 1023 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 LIN52Q52LA3 116 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 HOOK3Q86VS8 718 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 TTC8Q8TAM2 541 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 IRGQQ8WZA9 623 aa10.38□□□□□ -0.75
SIX4-202ENST00000554079 PAGE5Q96GU1 130 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms