RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 A0A0U1RQG5 324 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-209ENST00000553855 A0A1W2PQ45 241 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-209ENST00000553855 A0A1W2PQY0 241 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 RBM47A0AV96 593 aaKnown RBP9.53□□□□□ -0.88
PSEN1-209ENST00000553855 DCDC2CA8MYV0 355 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 OPLAHO14841 1288 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 TLR3O15455 904 aaKnown RBP9.53□□□□□ -0.88
PSEN1-209ENST00000553855 MYL3P08590 195 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 TGFB3P10600 412 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 COL6A1P12109 1028 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 ZNF76P36508 570 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 AK2P54819 239 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 NLRP5P59047 1200 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 AP3B2Q13367 1082 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 LAMC2Q13753 1193 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 C8orf34Q49A92 452 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 SLC39A5Q6ZMH5 540 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 KLHDC9Q8NEP7 349 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 PHKBQ93100 1093 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 CDHR1Q96JP9 859 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 PRR14Q9BWN1 585 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 SEZ6LQ9BYH1 1024 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 MLXIPQ9HAP2 919 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 NCOA5Q9HCD5 579 aaKnown RBP9.53□□□□□ -0.88
PSEN1-209ENST00000553855 RIC8AQ9NPQ8 531 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 TFIP11Q9UBB9 837 aaKnown RBP9.53□□□□□ -0.88
PSEN1-209ENST00000553855 PCDHA6Q9UN73 950 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 GNEQ9Y223 722 aaKnown RBP9.53□□□□□ -0.88
PSEN1-209ENST00000553855 PCDHA8Q9Y5H6 950 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 DDX49Q9Y6V7 483 aaKnown RBP9.53□□□□□ -0.88
PSEN1-209ENST00000553855 ELP1O95163 1332 aa9.53□□□□□ -0.88
PSEN1-209ENST00000553855 STXBP3O00186 592 aa9.52□□□□□ -0.89
PSEN1-209ENST00000553855 NOP56O00567 594 aaKnown RBP9.52□□□□□ -0.89
PSEN1-209ENST00000553855 MEIS2O14770 477 aa9.52□□□□□ -0.89
PSEN1-209ENST00000553855 FIBPO43427 364 aa9.52□□□□□ -0.89
PSEN1-209ENST00000553855 RTP1P59025 263 aa9.52□□□□□ -0.89
PSEN1-209ENST00000553855 BEX3Q00994 111 aa9.52□□□□□ -0.89
PSEN1-209ENST00000553855 NEDD9Q14511 834 aa9.52□□□□□ -0.89
PSEN1-209ENST00000553855 UBE2SQ16763 222 aa9.52□□□□□ -0.89
PSEN1-209ENST00000553855 PCNX4Q63HM2 1172 aa9.52□□□□□ -0.89
PSEN1-209ENST00000553855 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
PSEN1-209ENST00000553855 FAM177A1Q8N128 213 aaPredicted RBP9.52□□□□□ -0.89
PSEN1-209ENST00000553855 GIMAP8Q8ND71 665 aaPredicted RBP9.52□□□□□ -0.89
PSEN1-209ENST00000553855 ZSCAN31Q96LW9 406 aaPredicted RBP9.52□□□□□ -0.89
PSEN1-209ENST00000553855 LBHD1Q9BQE6 289 aaPredicted RBP9.52□□□□□ -0.89
PSEN1-209ENST00000553855 GZF1Q9H116 711 aaPredicted RBP9.52□□□□□ -0.89
PSEN1-209ENST00000553855 BRMS1Q9HCU9 246 aa9.52□□□□□ -0.89
PSEN1-209ENST00000553855 SH3GLB2Q9NR46 395 aa9.52□□□□□ -0.89
PSEN1-209ENST00000553855 TCEAL9Q9UHQ7 104 aa9.52□□□□□ -0.89
PSEN1-209ENST00000553855 HTTP42858 3142 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 ESYT2A0FGR8 921 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 PFKFB2O60825 505 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 BRD1O95696 1058 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 CHMP4BP1P59074 171 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 NKX3-2P78367 333 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 TRIM29Q14134 588 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 RABEP1Q15276 862 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 DGKDQ16760 1214 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 LY6KQ17RY6 165 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 LRRC26Q2I0M4 334 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 TMCO4Q5TGY1 634 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 CXCL17Q6UXB2 119 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 REXO1Q8N1G1 1221 aaKnown RBP9.51□□□□□ -0.89
PSEN1-209ENST00000553855 IL17RAQ96F46 866 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 MTG1Q9BT17 334 aaPredicted RBP9.51□□□□□ -0.89
PSEN1-209ENST00000553855 ANO3Q9BYT9 981 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 PRDM5Q9NQX1 630 aaPredicted RBP9.51□□□□□ -0.89
PSEN1-209ENST00000553855 RTEL1Q9NZ71 1219 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 DDX41Q9UJV9 622 aaKnown RBP9.51□□□□□ -0.89
PSEN1-209ENST00000553855 TPCN1Q9ULQ1 816 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 ZMYND8Q9ULU4 1186 aaPredicted RBP9.51□□□□□ -0.89
PSEN1-209ENST00000553855 LIMCH1Q9UPQ0 1083 aa9.51□□□□□ -0.89
PSEN1-209ENST00000553855 MYH6P13533 1939 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 MYADML2A6NDP7 307 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 H0YGN5 161 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 ARVCFO00192 962 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 MAFGO15525 162 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 ADCY6O43306 1168 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 PQBP1O60828 265 aaKnown RBP9.5□□□□□ -0.89
PSEN1-209ENST00000553855 GGPS1O95749 300 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 RBM25P49756 843 aaKnown RBP9.5□□□□□ -0.89
PSEN1-209ENST00000553855 KCNA1Q09470 495 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 SCRN1Q12765 414 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 NR1H3Q13133 447 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 NTRK3Q16288 839 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 TRIM60Q495X7 471 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 FAM47CQ5HY64 1035 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 C1orf53Q5VUE5 145 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 JAKMIP3Q5VZ66 844 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 GALNT17Q6IS24 598 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 CCDC62Q6P9F0 684 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 COPS5Q92905 334 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 GPRASP2Q96D09 838 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 SPATA33Q96N06 139 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 KATNAL1Q9BW62 490 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 ZMYND12Q9H0C1 365 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 VPS54Q9P1Q0 977 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 ORC3Q9UBD5 711 aaPredicted RBP9.5□□□□□ -0.89
PSEN1-209ENST00000553855 NOD1Q9Y239 953 aa9.5□□□□□ -0.89
PSEN1-209ENST00000553855 MAFBQ9Y5Q3 323 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms