RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 MIEF2Q96C03 454 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 FAM210AQ96ND0 272 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 P2RX7Q99572 595 aaKnown RBP13.49□□□□□ -0.25
SHMT2-207ENST00000553837 MCM8Q9UJA3 840 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 ATF5Q9Y2D1 282 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-207ENST00000553837 ARFGEF1Q9Y6D6 1849 aa13.49□□□□□ -0.25
SHMT2-207ENST00000553837 ZEB2O60315 1214 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 HSF2BPO75031 334 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 ELF1P32519 619 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 NF2P35240 595 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 AMPD3Q01432 767 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 TBC1D8BQ0IIM8 1120 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 PDIA5Q14554 519 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 PLCB4Q15147 1175 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 PREPLQ4J6C6 727 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-207ENST00000553837 TTC19Q6DKK2 380 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-207ENST00000553837 PPP4R3AQ6IN85 833 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 PPP1R18Q6NYC8 613 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 CNNM4Q6P4Q7 775 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 UNC13DQ70J99 1090 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 MMGT1Q8N4V1 131 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 STK17AQ9UEE5 414 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 DDX25Q9UHL0 483 aaKnown RBP13.48□□□□□ -0.25
SHMT2-207ENST00000553837 BICDL2A1A5D9 508 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 HLA-DOAP06340 250 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 EEF2P13639 858 aaKnown RBP13.48□□□□□ -0.25
SHMT2-207ENST00000553837 ALDH1B1P30837 517 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 SMTNP53814 917 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 EHHADHQ08426 723 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 LRRC41Q15345 812 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 MEA1Q16626 185 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 ZSCAN29Q8IWY8 852 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-207ENST00000553837 CUL5Q93034 780 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 ZDHHC15Q96MV8 337 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 NOC4LQ9BVI4 516 aaKnown RBP13.48□□□□□ -0.25
SHMT2-207ENST00000553837 PSTPIP2Q9H939 334 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 VEZTQ9HBM0 779 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 KLC4Q9NSK0 619 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 GGA2Q9UJY4 613 aa13.48□□□□□ -0.25
SHMT2-207ENST00000553837 ZNF646O15015 1829 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-207ENST00000553837 RCCD1A6NED2 376 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 EPHB6O15197 1021 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 TAL1P17542 331 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-207ENST00000553837 MTIF2P46199 727 aaKnown RBP13.47□□□□□ -0.25
SHMT2-207ENST00000553837 SNAP25P60880 206 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 JAG1P78504 1218 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 TMEM266Q2M3C6 531 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 QRICH1Q2TAL8 776 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 GPATCH4Q5T3I0 446 aaKnown RBP13.47□□□□□ -0.25
SHMT2-207ENST00000553837 KIAA1328Q86T90 577 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 DDX12PQ92771 950 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 CCDC47Q96A33 483 aaKnown RBP13.47□□□□□ -0.25
SHMT2-207ENST00000553837 MASTLQ96GX5 879 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 FGFBP2Q9BYJ0 223 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-207ENST00000553837 PVALEFA0A1B0GWK0 134 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 ANKRD33BA6NCL7 494 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 G3V3G9 751 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 RAD21O60216 631 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 PDE6BP35913 854 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 EPHB4P54760 987 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 ITIH3Q06033 890 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 DACT2Q5SW24 774 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 EMBQ6PCB8 327 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 DNAJC19Q96DA6 116 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 EPN3Q9H201 632 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 CD248Q9HCU0 757 aa13.47□□□□□ -0.25
SHMT2-207ENST00000553837 IDEP14735 1019 aa13.46□□□□□ -0.25
SHMT2-207ENST00000553837 CDR1P51861 262 aa13.46□□□□□ -0.25
SHMT2-207ENST00000553837 NAP1L1P55209 391 aaKnown RBP13.46□□□□□ -0.25
SHMT2-207ENST00000553837 ACTN3Q08043 901 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-207ENST00000553837 C2orf54Q08AI8 447 aa13.46□□□□□ -0.25
SHMT2-207ENST00000553837 SEPT2Q15019 361 aa13.46□□□□□ -0.25
SHMT2-207ENST00000553837 WLSQ5T9L3 541 aa13.46□□□□□ -0.25
SHMT2-207ENST00000553837 KRT79Q5XKE5 535 aa13.46□□□□□ -0.25
SHMT2-207ENST00000553837 FAXDC2Q96IV6 333 aa13.46□□□□□ -0.25
SHMT2-207ENST00000553837 ERGIC2Q96RQ1 377 aa13.46□□□□□ -0.25
SHMT2-207ENST00000553837 VCPKMTQ9H867 229 aa13.46□□□□□ -0.25
SHMT2-207ENST00000553837 JADE2Q9NQC1 790 aa13.46□□□□□ -0.25
SHMT2-207ENST00000553837 PDE2AO00408 941 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 PLEKP08567 350 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 TRIM21P19474 475 aaKnown RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 MRPL12P52815 198 aaKnown RBP13.45□□□□□ -0.26
SHMT2-207ENST00000553837 APBA1Q02410 837 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 PDCLQ13371 301 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 DRP2Q13474 957 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 CCDC40Q4G0X9 1142 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 TTMPQ5BVD1 217 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 LRRC55Q6ZSA7 311 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 PODNQ7Z5L7 613 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 MKL1Q969V6 931 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 ARL8AQ96BM9 186 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 LACRTQ9GZZ8 138 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 SIK3Q9Y2K2 1263 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 SLX4Q8IY92 1834 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 E9PMD0 336 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 ZNF263O14978 683 aa13.45□□□□□ -0.26
SHMT2-207ENST00000553837 ZNF185O15231 689 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms