RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 SRPRBQ9Y5M8 271 aaKnown RBP20.34■□□□□ 0.85
PSEN1-208ENST00000553719 IGKV6D-21A0A0A0MT36 114 aa20.33■□□□□ 0.85
PSEN1-208ENST00000553719 POTEMA6NI47 508 aa20.33■□□□□ 0.85
PSEN1-208ENST00000553719 MMP3P08254 477 aa20.33■□□□□ 0.85
PSEN1-208ENST00000553719 MARCKSP29966 332 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-208ENST00000553719 ACTR2P61160 394 aa20.33■□□□□ 0.85
PSEN1-208ENST00000553719 PDIA5Q14554 519 aa20.33■□□□□ 0.85
PSEN1-208ENST00000553719 ABHD15Q6UXT9 468 aa20.33■□□□□ 0.85
PSEN1-208ENST00000553719 DTHD1Q6ZMT9 781 aa20.33■□□□□ 0.85
PSEN1-208ENST00000553719 RDM1Q8NG50 284 aa20.33■□□□□ 0.85
PSEN1-208ENST00000553719 KCNG4Q8TDN1 519 aa20.33■□□□□ 0.85
PSEN1-208ENST00000553719 SCAND2PQ9GZW5 306 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-208ENST00000553719 CRISPLD2Q9H0B8 497 aa20.33■□□□□ 0.85
PSEN1-208ENST00000553719 RNF208Q9H0X6 261 aa20.33■□□□□ 0.85
PSEN1-208ENST00000553719 OGDHLQ9ULD0 1010 aa20.33■□□□□ 0.85
PSEN1-208ENST00000553719 PGK1P00558 417 aa20.32■□□□□ 0.84
PSEN1-208ENST00000553719 GJB1P08034 283 aa20.32■□□□□ 0.84
PSEN1-208ENST00000553719 TECP42680 631 aa20.32■□□□□ 0.84
PSEN1-208ENST00000553719 AXDND1Q5T1B0 1012 aaPredicted RBP20.32■□□□□ 0.84
PSEN1-208ENST00000553719 COL13A1Q5TAT6 717 aaPredicted RBP20.32■□□□□ 0.84
PSEN1-208ENST00000553719 DEFB118Q96PH6 123 aa20.32■□□□□ 0.84
PSEN1-208ENST00000553719 PCYT2Q99447 389 aa20.32■□□□□ 0.84
PSEN1-208ENST00000553719 VWA3AA6NCI4 1184 aa20.31■□□□□ 0.84
PSEN1-208ENST00000553719 WDR64B1ANS9 1081 aa20.31■□□□□ 0.84
PSEN1-208ENST00000553719 MARCH6O60337 910 aa20.31■□□□□ 0.84
PSEN1-208ENST00000553719 LGR5O75473 907 aa20.31■□□□□ 0.84
PSEN1-208ENST00000553719 NCLP19338 710 aaKnown RBP20.31■□□□□ 0.84
PSEN1-208ENST00000553719 SFNP31947 248 aa20.31■□□□□ 0.84
PSEN1-208ENST00000553719 CPT1AP50416 773 aa20.31■□□□□ 0.84
PSEN1-208ENST00000553719 JAK3P52333 1124 aa20.31■□□□□ 0.84
PSEN1-208ENST00000553719 FSCN1Q16658 493 aaKnown RBP20.31■□□□□ 0.84
PSEN1-208ENST00000553719 TMEM266Q2M3C6 531 aa20.31■□□□□ 0.84
PSEN1-208ENST00000553719 KRI1Q8N9T8 703 aaKnown RBP20.31■□□□□ 0.84
PSEN1-208ENST00000553719 SEPT1Q8WYJ6 367 aa20.31■□□□□ 0.84
PSEN1-208ENST00000553719 SPATA32Q96LK8 384 aa20.31■□□□□ 0.84
PSEN1-208ENST00000553719 AP5M1Q9H0R1 490 aa20.31■□□□□ 0.84
PSEN1-208ENST00000553719 DISC1Q9NRI5 854 aa20.31■□□□□ 0.84
PSEN1-208ENST00000553719 EMSYQ7Z589 1322 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 CHMP2AO43633 222 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 PPFIA4O75335 1185 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 MYCP01106 439 aaPredicted RBP20.3■□□□□ 0.84
PSEN1-208ENST00000553719 C6orf222P0C671 652 aaPredicted RBP20.3■□□□□ 0.84
PSEN1-208ENST00000553719 SUPT20HL2P0C7V6 817 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 TCF7P36402 384 aaPredicted RBP20.3■□□□□ 0.84
PSEN1-208ENST00000553719 LONP1P36776 959 aaKnown RBP20.3■□□□□ 0.84
PSEN1-208ENST00000553719 BEX3Q00994 111 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 SP4Q02446 784 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 LRRC41Q15345 812 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 CCDC60Q8IWA6 550 aaPredicted RBP20.3■□□□□ 0.84
PSEN1-208ENST00000553719 TMEM87AQ8NBN3 555 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 AK8Q96MA6 479 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 CLIC6Q96NY7 704 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 GDPD2Q9HCC8 539 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 PCDHA7Q9UN72 937 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 PCDHA10Q9Y5I2 948 aa20.3■□□□□ 0.84
PSEN1-208ENST00000553719 IGSF9BQ9UPX0 1349 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 KIAA0100Q14667 2235 aaKnown RBP20.29■□□□□ 0.84
PSEN1-208ENST00000553719 SCN10AQ9Y5Y9 1956 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 NOP56O00567 594 aaKnown RBP20.29■□□□□ 0.84
PSEN1-208ENST00000553719 SGPL1O95470 568 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 EPHA7Q15375 998 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 NCAPH2Q6IBW4 605 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 MIER3Q7Z3K6 550 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 ZNF579Q8NAF0 562 aaKnown RBP20.29■□□□□ 0.84
PSEN1-208ENST00000553719 AFAP1L1Q8TED9 768 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 U2AF1L4Q8WU68 220 aaKnown RBP20.29■□□□□ 0.84
PSEN1-208ENST00000553719 HSD17B14Q9BPX1 270 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 C16orf70Q9BSU1 422 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 MMTAG2Q9BU76 263 aaKnown RBP20.29■□□□□ 0.84
PSEN1-208ENST00000553719 CSRNP2Q9H175 543 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 SPC25Q9HBM1 224 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 LRWD1Q9UFC0 647 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 TCEAL9Q9UHQ7 104 aa20.29■□□□□ 0.84
PSEN1-208ENST00000553719 PP2D1A8MPX8 630 aa20.28■□□□□ 0.84
PSEN1-208ENST00000553719 CUTAO60888 179 aa20.28■□□□□ 0.84
PSEN1-208ENST00000553719 LGALS2P05162 132 aa20.28■□□□□ 0.84
PSEN1-208ENST00000553719 GJA8P48165 433 aa20.28■□□□□ 0.84
PSEN1-208ENST00000553719 MNX1P50219 401 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-208ENST00000553719 DGKDQ16760 1214 aa20.28■□□□□ 0.84
PSEN1-208ENST00000553719 RAB34Q9BZG1 259 aa20.28■□□□□ 0.84
PSEN1-208ENST00000553719 MAFBQ9Y5Q3 323 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-208ENST00000553719 F2P00734 622 aa20.27■□□□□ 0.84
PSEN1-208ENST00000553719 PSAPP07602 524 aa20.27■□□□□ 0.84
PSEN1-208ENST00000553719 SPATA31C1P0DKV0 1188 aa20.27■□□□□ 0.84
PSEN1-208ENST00000553719 PURAQ00577 322 aaKnown RBP20.27■□□□□ 0.84
PSEN1-208ENST00000553719 UGCGQ16739 394 aa20.27■□□□□ 0.84
PSEN1-208ENST00000553719 GNASQ5JWF2 1037 aa20.27■□□□□ 0.84
PSEN1-208ENST00000553719 MIS18BP1Q6P0N0 1132 aa20.27■□□□□ 0.84
PSEN1-208ENST00000553719 SHC4Q6S5L8 630 aa20.27■□□□□ 0.84
PSEN1-208ENST00000553719 RNF180Q86T96 592 aa20.27■□□□□ 0.84
PSEN1-208ENST00000553719 TRIM50Q86XT4 487 aa20.27■□□□□ 0.84
PSEN1-208ENST00000553719 NEK9Q8TD19 979 aa20.27■□□□□ 0.84
PSEN1-208ENST00000553719 KAT2BQ92831 832 aa20.27■□□□□ 0.84
PSEN1-208ENST00000553719 EIF2AK1Q9BQI3 630 aaKnown RBP20.27■□□□□ 0.84
PSEN1-208ENST00000553719 POLR3CQ9BUI4 534 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-208ENST00000553719 WRAP73Q9P2S5 460 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-208ENST00000553719 SLITRK3O94933 977 aa20.26■□□□□ 0.83
PSEN1-208ENST00000553719 ZNF286BP0CG31 522 aa20.26■□□□□ 0.83
PSEN1-208ENST00000553719 CDC25AP30304 524 aa20.26■□□□□ 0.83
PSEN1-208ENST00000553719 ME1P48163 572 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms