RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CCDC66A2RUB6 948 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 ASLP04424 464 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 AMY2AP04746 511 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 INHBBP09529 407 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 PYGMP11217 842 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 AMY2BP19961 511 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 KIAA2012Q0VF49 1180 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 TCEA2Q15560 299 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 ARHGAP44Q17R89 818 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 VASNQ6EMK4 673 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 EP400NLQ6ZTU2 488 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 BRAPQ7Z569 592 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 PROSER1Q86XN7 944 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 HOMER1Q86YM7 354 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 DTX3Q8N9I9 347 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 RNPC3Q96LT9 517 aaKnown RBP4.95□□□□□ -1.62
VRK1-202ENST00000553683 XYLT2Q9H1B5 865 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 PIF1Q9H611 641 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 RTEL1Q9NZ71 1219 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 TELO2Q9Y4R8 837 aa4.95□□□□□ -1.62
VRK1-202ENST00000553683 MAN2B1O00754 1011 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 ZNF28P17035 718 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 KCNA6P17658 529 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 PTPN1P18031 435 aaKnown RBP4.94□□□□□ -1.62
VRK1-202ENST00000553683 IGFALSP35858 605 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 C16orf86Q6ZW13 317 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 DDX53Q86TM3 631 aaKnown RBP4.94□□□□□ -1.62
VRK1-202ENST00000553683 FAM124AQ86V42 546 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 OSTM1Q86WC4 334 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 ZNF761Q86XN6 746 aaPredicted RBP4.94□□□□□ -1.62
VRK1-202ENST00000553683 IGDCC4Q8TDY8 1250 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 ADAMTS17Q8TE56 1095 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 APPBP2Q92624 585 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 TEPSINQ96N21 525 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 ORAI3Q9BRQ5 295 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 SMURF1Q9HCE7 757 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 CBLCQ9ULV8 474 aa4.94□□□□□ -1.62
VRK1-202ENST00000553683 ZNF839A8K0R7 811 aa4.93□□□□□ -1.62
VRK1-202ENST00000553683 ACOT7O00154 380 aa4.93□□□□□ -1.62
VRK1-202ENST00000553683 NOBOXO60393 691 aa4.93□□□□□ -1.62
VRK1-202ENST00000553683 HOXA5P20719 270 aa4.93□□□□□ -1.62
VRK1-202ENST00000553683 FLT3P36888 993 aa4.93□□□□□ -1.62
VRK1-202ENST00000553683 GJA9P57773 515 aa4.93□□□□□ -1.62
VRK1-202ENST00000553683 DBPQ10586 325 aaPredicted RBP4.93□□□□□ -1.62
VRK1-202ENST00000553683 SMAD4Q13485 552 aaKnown RBP4.93□□□□□ -1.62
VRK1-202ENST00000553683 BTBD8Q5XKL5 378 aa4.93□□□□□ -1.62
VRK1-202ENST00000553683 CD276Q5ZPR3 534 aa4.93□□□□□ -1.62
VRK1-202ENST00000553683 OTOP1Q7RTM1 612 aa4.93□□□□□ -1.62
VRK1-202ENST00000553683 OVCH1Q7RTY7 1134 aa4.93□□□□□ -1.62
VRK1-202ENST00000553683 MAGEC2Q9UBF1 373 aaPredicted RBP4.93□□□□□ -1.62
VRK1-202ENST00000553683 CNOT11Q9UKZ1 510 aaKnown RBP4.93□□□□□ -1.62
VRK1-202ENST00000553683 RASGRP1O95267 797 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 SRGAP2CP0DJJ0 459 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 SDHAP31040 664 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 IL13P35225 146 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 DNM2P50570 870 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 JAM2P57087 298 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 GRIN1Q05586 938 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 VMACQ2NL98 169 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 ERICH6BQ5W0A0 696 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 ZCCHC8Q6NZY4 707 aaKnown RBP4.92□□□□□ -1.62
VRK1-202ENST00000553683 DPP8Q6V1X1 898 aaPredicted RBP4.92□□□□□ -1.62
VRK1-202ENST00000553683 CXXC5Q7LFL8 322 aaKnown RBP4.92□□□□□ -1.62
VRK1-202ENST00000553683 FGD2Q7Z6J4 655 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 PTRH1Q86Y79 214 aaKnown RBP4.92□□□□□ -1.62
VRK1-202ENST00000553683 KIF18BQ86Y91 864 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 CXorf38Q8TB03 319 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 YTHDC1Q96MU7 727 aaKnown RBP4.92□□□□□ -1.62
VRK1-202ENST00000553683 CD244Q9BZW8 370 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 KCNH7Q9NS40 1196 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 WASF3Q9UPY6 502 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 PLAAQ9Y263 795 aa4.92□□□□□ -1.62
VRK1-202ENST00000553683 SLC12A8A0AV02 714 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 ESYT3A0FGR9 886 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 MROH6A6NGR9 719 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 OTOL1A6NHN0 477 aaPredicted RBP4.91□□□□□ -1.62
VRK1-202ENST00000553683 FAM90A27PA6NNH2 459 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 ENPP3O14638 875 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 RAPGEF3O95398 923 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 ASMTLO95671 621 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 LTFP02788 710 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 C4BPAP04003 597 aaKnown RBP4.91□□□□□ -1.62
VRK1-202ENST00000553683 POU3F2P20265 443 aaPredicted RBP4.91□□□□□ -1.62
VRK1-202ENST00000553683 MECP2P51608 486 aaKnown RBP4.91□□□□□ -1.62
VRK1-202ENST00000553683 PFKPQ01813 784 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 SURF1Q15526 300 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 SMAD2Q15796 467 aaKnown RBP4.91□□□□□ -1.62
VRK1-202ENST00000553683 SKIDA1Q1XH10 827 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 TMEM177Q53S58 311 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 PRAMEF18Q5VWM3 479 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 BORAQ6PGQ7 559 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 NOSTRINQ8IVI9 506 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 DLG3Q92796 817 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 LCORQ96JN0 433 aaPredicted RBP4.91□□□□□ -1.62
VRK1-202ENST00000553683 CLUHP3Q96NS8 147 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 SPATA25Q9BR10 227 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 L2HGDHQ9H9P8 463 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 KCND1Q9NSA2 647 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 USP40Q9NVE5 1235 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 RIC8BQ9NVN3 520 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms