RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 RBM12BQ8IXT5 1001 aaKnown RBP4.48□□□□□ -1.69
RDH11-204ENST00000553578 TRIM22Q8IYM9 498 aa4.48□□□□□ -1.69
RDH11-204ENST00000553578 VWA5B2Q8N398 1253 aa4.48□□□□□ -1.69
RDH11-204ENST00000553578 TMCO5AQ8N6Q1 288 aa4.48□□□□□ -1.69
RDH11-204ENST00000553578 HELQQ8TDG4 1101 aa4.48□□□□□ -1.69
RDH11-204ENST00000553578 INTS4Q96HW7 963 aaKnown RBP4.48□□□□□ -1.69
RDH11-204ENST00000553578 SLC4A9Q96Q91 983 aa4.48□□□□□ -1.69
RDH11-204ENST00000553578 FHDC1Q9C0D6 1143 aaPredicted RBP4.48□□□□□ -1.69
RDH11-204ENST00000553578 SPTLC3Q9NUV7 552 aa4.48□□□□□ -1.69
RDH11-204ENST00000553578 STIM2Q9P246 746 aa4.48□□□□□ -1.69
RDH11-204ENST00000553578 ZNF215Q9UL58 517 aaPredicted RBP4.48□□□□□ -1.69
RDH11-204ENST00000553578 PCDHB10Q9UN67 800 aa4.48□□□□□ -1.69
RDH11-204ENST00000553578 PNMA6EA0A0J9YXQ4 647 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 H3BM21 787 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 BAG4O95429 457 aaKnown RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 FGAP02671 866 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 ZNF24P17028 368 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 ICA1Q05084 483 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 GRIK3Q13003 919 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 SLC5A9Q2M3M2 681 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 KBTBD12Q3ZCT8 623 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 CCDC149Q6ZUS6 474 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 FBXO33Q7Z6M2 555 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 STAG1Q8WVM7 1258 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 RMDN2Q96LZ7 410 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 TRIM7Q9C029 511 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 TBC1D7Q9P0N9 293 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 KANSL3Q9P2N6 904 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 LZTS1Q9Y250 596 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 PNMA6AP0CW24 399 aaPredicted RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 L1CAMP32004 1257 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 MAN1A1P33908 653 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 SCNN1BP51168 640 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 ZBED6P86452 979 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 PDE1CQ14123 709 aaPredicted RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 CCDC92Q53HC0 331 aaPredicted RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 TREML4Q6UXN2 200 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 CCDC80Q76M96 950 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 CEP57L1Q8IYX8 460 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.47□□□□□ -1.69
RDH11-204ENST00000553578 DYDC1Q8WWB3 177 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 MMTAG2Q9BU76 263 aaKnown RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 FTOQ9C0B1 505 aaKnown RBP eCLIP4.47□□□□□ -1.69
RDH11-204ENST00000553578 GINM1Q9NU53 330 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 CLIP2Q9UDT6 1046 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 PYCARDQ9ULZ3 195 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 TLR6Q9Y2C9 796 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 PCDHGB6Q9Y5F9 930 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 SNX13Q9Y5W8 968 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 CDK5RAP2Q96SN8 1893 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 GREB1LQ9C091 1923 aaPredicted RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 SERTM1A2A2V5 107 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 SYNDIG1LA6NDD5 238 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 GRM8O00222 908 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 KCNQ3O43525 872 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 TP53P04637 393 aaPredicted RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 CYP11B2P19099 503 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 EVCP57679 992 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 PSMA6P60900 246 aaKnown RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 RAB3GAP1Q15042 981 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 LONRF1Q17RB8 773 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 CEP135Q66GS9 1140 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 CCDC33Q8N5R6 958 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 SYAP1Q96A49 352 aaPredicted RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 E2F7Q96AV8 911 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 TTC14Q96N46 770 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 NUDT16L1Q9BRJ7 211 aaKnown RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 AGXT2Q9BYV1 514 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 LRRCC1Q9C099 1032 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 PHAXQ9H814 394 aaKnown RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 PTPRHQ9HD43 1115 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 CUEDC1Q9NWM3 386 aaPredicted RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 ACTR10Q9NZ32 417 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 SCHIP1Q9P0W5 487 aaPredicted RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 FBXO2Q9UK22 296 aaPredicted RBP4.47□□□□□ -1.69
RDH11-204ENST00000553578 PHF24Q9UPV7 400 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 EXOC6BQ9Y2D4 811 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 SCINQ9Y6U3 715 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 SH3TC1Q8TE82 1336 aa4.47□□□□□ -1.69
RDH11-204ENST00000553578 M0R2N6 131 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 ZSCAN9O15535 394 aaPredicted RBP4.46□□□□□ -1.69
RDH11-204ENST00000553578 EZRP15311 586 aaKnown RBP4.46□□□□□ -1.69
RDH11-204ENST00000553578 HSPA4P34932 840 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 MAGEA10P43363 369 aaPredicted RBP4.46□□□□□ -1.69
RDH11-204ENST00000553578 KCNJ6P48051 423 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 MCM2P49736 904 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 NT5C2P49902 561 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 VPS72Q15906 364 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 SLFN12Q8IYM2 578 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 TEX19Q8NA77 164 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 GMCL1Q96IK5 515 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 CHAMP1Q96JM3 812 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 PLEKHA4Q9H4M7 779 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 ZSCAN16Q9H4T2 348 aaPredicted RBP4.46□□□□□ -1.69
RDH11-204ENST00000553578 INCENPQ9NQS7 918 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 ZNHIT6Q9NWK9 470 aaKnown RBP4.46□□□□□ -1.69
RDH11-204ENST00000553578 N6AMT1Q9Y5N5 214 aa4.46□□□□□ -1.69
RDH11-204ENST00000553578 WDR19Q8NEZ3 1342 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 CNTNAP4Q9C0A0 1308 aa4.46□□□□□ -1.7
RDH11-204ENST00000553578 IRS2Q9Y4H2 1338 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms