RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 BAP1Q92560 729 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 EEF2KMTQ96G04 330 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 LACRTQ9GZZ8 138 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 SH2D4AQ9H788 454 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 VIPAS39Q9H9C1 493 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 FAM207AQ9NSI2 230 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-205ENST00000553474 HERC5Q9UII4 1024 aaKnown RBP14.27□□□□□ -0.13
SHMT2-205ENST00000553474 TSKSQ9UJT2 592 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 PCDHA13Q9Y5I0 950 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 CCDC66A2RUB6 948 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 DDTLA6NHG4 134 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-205ENST00000553474 USP17L15C9J2P7 530 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 USP17L13C9JLJ4 530 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 USP17L11C9JVI0 530 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 USP17L18D6R9N7 530 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 USP17L22D6RA61 530 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 USP17L17D6RBQ6 530 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 USP17L19D6RCP7 530 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 USP17L20D6RJB6 530 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 AKR1B10O60218 316 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 ATP1A1P05023 1023 aaKnown RBP14.26□□□□□ -0.13
SHMT2-205ENST00000553474 CYP3A4P08684 503 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 USP14P54578 494 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 SLC12A3P55017 1021 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 SPIRE1Q08AE8 756 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 USP17L24Q0WX57 530 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 SLC9C1Q4G0N8 1177 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 CCDC40Q4G0X9 1142 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 PDXDC1Q6P996 788 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 USP17L6PQ6QN14 398 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 GPBP1Q86WP2 473 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 PNKPQ96T60 521 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 EMILIN3Q9NT22 766 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 TRIM10Q9UDY6 481 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 DNM3Q9UQ16 869 aa14.26□□□□□ -0.13
SHMT2-205ENST00000553474 ZBTB12Q9Y330 459 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-205ENST00000553474 A0A0U1RQG5 324 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-205ENST00000553474 LRRC53A6NM62 1247 aa14.25□□□□□ -0.13
SHMT2-205ENST00000553474 TCP1P17987 556 aaKnown RBP14.25□□□□□ -0.13
SHMT2-205ENST00000553474 RBM5P52756 815 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHMT2-205ENST00000553474 TNIP1Q15025 636 aa14.25□□□□□ -0.13
SHMT2-205ENST00000553474 ASTE1Q2TB18 679 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-205ENST00000553474 HERC4Q5GLZ8 1057 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-205ENST00000553474 SYDE2Q5VT97 1194 aa14.25□□□□□ -0.13
SHMT2-205ENST00000553474 NCAPH2Q6IBW4 605 aa14.25□□□□□ -0.13
SHMT2-205ENST00000553474 RRAGAQ7L523 313 aa14.25□□□□□ -0.13
SHMT2-205ENST00000553474 SIAH1Q8IUQ4 282 aa14.25□□□□□ -0.13
SHMT2-205ENST00000553474 KIAA0825Q8IV33 1275 aa14.25□□□□□ -0.13
SHMT2-205ENST00000553474 ZFPM1Q8IX07 1006 aa14.25□□□□□ -0.13
SHMT2-205ENST00000553474 SYT2Q8N9I0 419 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-205ENST00000553474 TANGO6Q9C0B7 1094 aa14.25□□□□□ -0.13
SHMT2-205ENST00000553474 KCTD10Q9H3F6 313 aa14.25□□□□□ -0.13
SHMT2-205ENST00000553474 TRAF3IP3Q9Y228 551 aa14.25□□□□□ -0.13
SHMT2-205ENST00000553474 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHMT2-205ENST00000553474 LOXHD1Q8IVV2 1947 aa14.25□□□□□ -0.13
SHMT2-205ENST00000553474 E9PMD0 336 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 TULP1O00294 542 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-205ENST00000553474 CETN3O15182 167 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 SERPING1P05155 500 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 BMP3P12645 472 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 MUTP22033 750 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 OAS2P29728 719 aaKnown RBP14.24□□□□□ -0.13
SHMT2-205ENST00000553474 CYP2C19P33261 490 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 RBM26Q5T8P6 1007 aaKnown RBP14.24□□□□□ -0.13
SHMT2-205ENST00000553474 RSBN1LQ6PCB5 846 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-205ENST00000553474 FRMD5Q7Z6J6 570 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 POLR3CQ9BUI4 534 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-205ENST00000553474 PSD3Q9NYI0 1048 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 RNF14Q9UBS8 474 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 SNX12Q9UMY4 172 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 MYH10P35580 1976 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 POTEB3A0JP26 581 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 RCCD1A6NED2 376 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 POTECB2RU33 542 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 ENC1O14682 589 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 ZNF263O14978 683 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 NDUFB10O96000 172 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 SSBP05455 408 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHMT2-205ENST00000553474 KRT18P05783 430 aaKnown RBP14.24□□□□□ -0.13
SHMT2-205ENST00000553474 RHOXF2BP0C7M4 288 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 ANXA13P27216 316 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 EIF4A3P38919 411 aaKnown RBP14.24□□□□□ -0.13
SHMT2-205ENST00000553474 VSNL1P62760 191 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 POTEBQ6S5H4 581 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 SH3BP5LQ7L8J4 393 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 NOA1Q8NC60 698 aaKnown RBP14.24□□□□□ -0.13
SHMT2-205ENST00000553474 SCFD1Q8WVM8 642 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 RHOXF2Q9BQY4 288 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 ABCB6Q9NP58 842 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 MED4Q9NPJ6 270 aa14.24□□□□□ -0.13
SHMT2-205ENST00000553474 ATP8B3O60423 1300 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 PDXKO00764 312 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 EPHB6O15197 1021 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 DDNO94850 711 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-205ENST00000553474 VIL1P09327 827 aaKnown RBP14.23□□□□□ -0.13
SHMT2-205ENST00000553474 GMPSP49915 693 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-205ENST00000553474 CYP27A1Q02318 531 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 KCNMA1Q12791 1236 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 TCP10Q12799 353 aa14.23□□□□□ -0.13
SHMT2-205ENST00000553474 LRRC41Q15345 812 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms