RNA–Protein interactions for RNA: ENST00000553131.5

ERBB3-221, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-221ENST00000553131 PACS1Q6VY07 963 aa8.8□□□□□ -1
ERBB3-221ENST00000553131 CCDC65Q8IXS2 484 aa8.8□□□□□ -1
ERBB3-221ENST00000553131 CCDC43Q96MW1 224 aaKnown RBP8.8□□□□□ -1
ERBB3-221ENST00000553131 ARHGAP20Q9P2F6 1191 aa8.8□□□□□ -1
ERBB3-221ENST00000553131 PLEKP08567 350 aaPredicted RBP8.79□□□□□ -1
ERBB3-221ENST00000553131 CXCR5P32302 372 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 PDE6BP35913 854 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 EIF4A3P38919 411 aaKnown RBP8.79□□□□□ -1
ERBB3-221ENST00000553131 MAGEA1P43355 309 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 BCAMP50895 628 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 MRPS25P82663 173 aaKnown RBP8.79□□□□□ -1
ERBB3-221ENST00000553131 PDE4DQ08499 809 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 NAA35Q5VZE5 725 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 KCTD16Q68DU8 428 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 CD302Q8IX05 232 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 IQCKQ8N0W5 287 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 SH2D3CQ8N5H7 860 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 RNPC3Q96LT9 517 aaKnown RBP8.79□□□□□ -1
ERBB3-221ENST00000553131 GDF3Q9NR23 364 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 GGA2Q9UJY4 613 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 ITGB4P16144 1822 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 SRRM3A6NNA2 597 aaPredicted RBP8.79□□□□□ -1
ERBB3-221ENST00000553131 PJA2O43164 708 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 PPP1R37O75864 691 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 KRT14P02533 472 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 HARSP12081 509 aaKnown RBP8.79□□□□□ -1
ERBB3-221ENST00000553131 IL2RBP14784 551 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 NR1D1P20393 614 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 NF2P35240 595 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.79□□□□□ -1
ERBB3-221ENST00000553131 CCDC84Q86UT8 332 aaPredicted RBP8.79□□□□□ -1
ERBB3-221ENST00000553131 MREGQ8N565 214 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 RNF10Q8N5U6 811 aaKnown RBP8.79□□□□□ -1
ERBB3-221ENST00000553131 NOX5Q96PH1 765 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 PSMB7Q99436 277 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 BRIP1Q9BX63 1249 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 INO80BQ9C086 356 aaPredicted RBP8.79□□□□□ -1
ERBB3-221ENST00000553131 SH3GLB2Q9NR46 395 aa8.79□□□□□ -1
ERBB3-221ENST00000553131 RBM12Q9NTZ6 932 aaKnown RBP8.79□□□□□ -1
ERBB3-221ENST00000553131 PPP1R1BQ9UD71 204 aaPredicted RBP8.79□□□□□ -1
ERBB3-221ENST00000553131 MYO1FO00160 1098 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 SNAP23O00161 211 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 LAD1O00515 517 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 FGRP09769 529 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 ADCY1Q08828 1119 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 PLCB4Q15147 1175 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 PTGISQ16647 500 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 MTHFD1LQ6UB35 978 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 ZNF473Q8WTR7 871 aaKnown RBP8.78□□□□□ -1
ERBB3-221ENST00000553131 DDX17Q92841 729 aaKnown RBP8.78□□□□□ -1
ERBB3-221ENST00000553131 PCDHA4Q9UN74 947 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 PP2D1A8MPX8 630 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 FOSL1P15407 271 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 ATF3P18847 181 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 KIF5BP33176 963 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 TMEM62Q0P6H9 643 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 VWA3BQ502W6 1294 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 C4orf46Q504U0 113 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 RNF187Q5TA31 235 aaPredicted RBP8.78□□□□□ -1
ERBB3-221ENST00000553131 ADGRA1Q86SQ6 560 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 WHAMMQ8TF30 809 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 EEF2KMTQ96G04 330 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 PLIN2Q99541 437 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 JPH2Q9BR39 696 aaPredicted RBP8.78□□□□□ -1
ERBB3-221ENST00000553131 TLR10Q9BXR5 811 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 HOXC10Q9NYD6 342 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 SMARCAL1Q9NZC9 954 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 NFU1Q9UMS0 254 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 ZNF233A6NK53 670 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 CHUKO15111 745 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 NCK2O43639 380 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 HEXIM1O94992 359 aaKnown RBP8.78□□□□□ -1
ERBB3-221ENST00000553131 MDH1P40925 334 aaKnown RBP8.78□□□□□ -1
ERBB3-221ENST00000553131 ASIC1P78348 528 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 AMPD3Q01432 767 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 GUCY1A3Q02108 690 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 DRP2Q13474 957 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 CNNM4Q6P4Q7 775 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 NLRP14Q86W24 1093 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.78□□□□□ -1
ERBB3-221ENST00000553131 ARFGAP2Q8N6H7 521 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 GABPB2Q8TAK5 448 aaPredicted RBP8.78□□□□□ -1
ERBB3-221ENST00000553131 IFT81Q8WYA0 676 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 ATP6V1G3Q96LB4 118 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 SLC39A3Q9BRY0 314 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 MMRN2Q9H8L6 949 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 EPB41L5Q9HCM4 733 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 TCP11L1Q9NUJ3 509 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 EHD2Q9NZN4 543 aa8.78□□□□□ -1
ERBB3-221ENST00000553131 CYP2D7A0A087X1C5 515 aa8.77□□□□□ -1.01
ERBB3-221ENST00000553131 GOLGA6L10A6NI86 522 aa8.77□□□□□ -1.01
ERBB3-221ENST00000553131 SMIM22K7EJ46 135 aa8.77□□□□□ -1.01
ERBB3-221ENST00000553131 FGFR1OPO95684 399 aaKnown RBP8.77□□□□□ -1.01
ERBB3-221ENST00000553131 GLI1P08151 1106 aa8.77□□□□□ -1.01
ERBB3-221ENST00000553131 CARSP49589 748 aaKnown RBP8.77□□□□□ -1.01
ERBB3-221ENST00000553131 SMTNP53814 917 aa8.77□□□□□ -1.01
ERBB3-221ENST00000553131 GUCY2DQ02846 1103 aa8.77□□□□□ -1.01
ERBB3-221ENST00000553131 ACTN3Q08043 901 aaPredicted RBP8.77□□□□□ -1.01
ERBB3-221ENST00000553131 MKRN3Q13064 507 aaKnown RBP8.77□□□□□ -1.01
ERBB3-221ENST00000553131 COL19A1Q14993 1142 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms