RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ADH1CP00326 375 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 MMP1P03956 469 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 RB1P06400 928 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 JUNDP17535 347 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 DUSP28Q4G0W2 176 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 GORABQ5T7V8 394 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.04□□□□□ -0.8
PRIM1-208ENST00000552590 DBF4BQ8NFT6 615 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 TOP1MTQ969P6 601 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 NUP88Q99567 741 aaPredicted RBP10.04□□□□□ -0.8
PRIM1-208ENST00000552590 RAVER2Q9HCJ3 691 aaKnown RBP10.04□□□□□ -0.8
PRIM1-208ENST00000552590 HOMER2Q9NSB8 354 aa10.04□□□□□ -0.8
PRIM1-208ENST00000552590 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.04□□□□□ -0.8
PRIM1-208ENST00000552590 NAV1Q8NEY1 1877 aa10.03□□□□□ -0.8
PRIM1-208ENST00000552590 POLR3DP05423 398 aaPredicted RBP10.03□□□□□ -0.8
PRIM1-208ENST00000552590 LINC00271P0C7V0 271 aa10.03□□□□□ -0.8
PRIM1-208ENST00000552590 NPR3P17342 541 aa10.03□□□□□ -0.8
PRIM1-208ENST00000552590 DNAJB1P25685 340 aa10.03□□□□□ -0.8
PRIM1-208ENST00000552590 ARID4AP29374 1257 aaPredicted RBP10.03□□□□□ -0.8
PRIM1-208ENST00000552590 EXOSC9Q06265 439 aaKnown RBP10.03□□□□□ -0.8
PRIM1-208ENST00000552590 TFCP2Q12800 502 aa10.03□□□□□ -0.8
PRIM1-208ENST00000552590 RALBP1Q15311 655 aa10.03□□□□□ -0.8
PRIM1-208ENST00000552590 FIBCD1Q8N539 461 aa10.03□□□□□ -0.8
PRIM1-208ENST00000552590 SUMF1Q8NBK3 374 aa10.03□□□□□ -0.8
PRIM1-208ENST00000552590 PPP2R3CQ969Q6 453 aa10.03□□□□□ -0.8
PRIM1-208ENST00000552590 SLF1Q9BQI6 1058 aa10.03□□□□□ -0.8
PRIM1-208ENST00000552590 IGSF5Q9NSI5 407 aa10.03□□□□□ -0.8
PRIM1-208ENST00000552590 ANGPTL2Q9UKU9 493 aa10.03□□□□□ -0.8
PRIM1-208ENST00000552590 FANCIQ9NVI1 1328 aa10.02□□□□□ -0.8
PRIM1-208ENST00000552590 CYSRT1A8MQ03 144 aa10.02□□□□□ -0.81
PRIM1-208ENST00000552590 PRR5-ARHGAP8B1AHC4 643 aa10.02□□□□□ -0.81
PRIM1-208ENST00000552590 USP17L12C9JPN9 530 aa10.02□□□□□ -0.81
PRIM1-208ENST00000552590 USP17L21D6R901 530 aa10.02□□□□□ -0.81
PRIM1-208ENST00000552590 ASGR2P07307 311 aa10.02□□□□□ -0.81
PRIM1-208ENST00000552590 AKR1B1P15121 316 aa10.02□□□□□ -0.81
PRIM1-208ENST00000552590 MARSP56192 900 aaKnown RBP10.02□□□□□ -0.81
PRIM1-208ENST00000552590 ARHGAP8P85298 464 aa10.02□□□□□ -0.81
PRIM1-208ENST00000552590 RBL2Q08999 1139 aa10.02□□□□□ -0.81
PRIM1-208ENST00000552590 ZNF618Q5T7W0 954 aa10.02□□□□□ -0.81
PRIM1-208ENST00000552590 CHST13Q8NET6 341 aa10.02□□□□□ -0.81
PRIM1-208ENST00000552590 OR6J1Q8NGC5 347 aa10.02□□□□□ -0.81
PRIM1-208ENST00000552590 FBXO40Q9UH90 709 aa10.02□□□□□ -0.81
PRIM1-208ENST00000552590 MSTNO14793 375 aa10.01□□□□□ -0.81
PRIM1-208ENST00000552590 ATP2A1O14983 1001 aa10.01□□□□□ -0.81
PRIM1-208ENST00000552590 EEF2P13639 858 aaKnown RBP10.01□□□□□ -0.81
PRIM1-208ENST00000552590 CYP7A1P22680 504 aa10.01□□□□□ -0.81
PRIM1-208ENST00000552590 ZNF200P98182 395 aaPredicted RBP10.01□□□□□ -0.81
PRIM1-208ENST00000552590 ZC3H14Q6PJT7 736 aaKnown RBP10.01□□□□□ -0.81
PRIM1-208ENST00000552590 IL17RAQ96F46 866 aa10.01□□□□□ -0.81
PRIM1-208ENST00000552590 SCARF2Q96GP6 870 aaPredicted RBP10.01□□□□□ -0.81
PRIM1-208ENST00000552590 RTP3Q9BQQ7 232 aa10.01□□□□□ -0.81
PRIM1-208ENST00000552590 APOL5Q9BWW9 433 aa10.01□□□□□ -0.81
PRIM1-208ENST00000552590 IFIH1Q9BYX4 1025 aaKnown RBP10.01□□□□□ -0.81
PRIM1-208ENST00000552590 WDR11Q9BZH6 1224 aa10.01□□□□□ -0.81
PRIM1-208ENST00000552590 A1CFQ9NQ94 594 aaKnown RBP10.01□□□□□ -0.81
PRIM1-208ENST00000552590 NCDNQ9UBB6 729 aa10.01□□□□□ -0.81
PRIM1-208ENST00000552590 PLAGL2Q9UPG8 496 aa10.01□□□□□ -0.81
PRIM1-208ENST00000552590 AKAP2Q9Y2D5 859 aa10.01□□□□□ -0.81
PRIM1-208ENST00000552590 COG6Q9Y2V7 657 aa10.01□□□□□ -0.81
PRIM1-208ENST00000552590 MYH8P13535 1937 aa10□□□□□ -0.81
PRIM1-208ENST00000552590 C2CD4DB7Z1M9 353 aa10□□□□□ -0.81
PRIM1-208ENST00000552590 PER2O15055 1255 aa10□□□□□ -0.81
PRIM1-208ENST00000552590 ZBED4O75132 1171 aa10□□□□□ -0.81
PRIM1-208ENST00000552590 PROS1P07225 676 aa10□□□□□ -0.81
PRIM1-208ENST00000552590 LMNB2Q03252 620 aa10□□□□□ -0.81
PRIM1-208ENST00000552590 VN1R2Q8NFZ6 395 aa10□□□□□ -0.81
PRIM1-208ENST00000552590 WNT8BQ93098 351 aa10□□□□□ -0.81
PRIM1-208ENST00000552590 KLF16Q9BXK1 252 aaPredicted RBP10□□□□□ -0.81
PRIM1-208ENST00000552590 GOPCQ9HD26 462 aa10□□□□□ -0.81
PRIM1-208ENST00000552590 VTA1Q9NP79 307 aa10□□□□□ -0.81
PRIM1-208ENST00000552590 ZMIZ1Q9ULJ6 1067 aa10□□□□□ -0.81
PRIM1-208ENST00000552590 CTDP1Q9Y5B0 961 aaPredicted RBP10□□□□□ -0.81
PRIM1-208ENST00000552590 AKAP13Q12802 2813 aa10□□□□□ -0.81
PRIM1-208ENST00000552590 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.99□□□□□ -0.81
PRIM1-208ENST00000552590 CYP2E1P05181 493 aaPredicted RBP9.99□□□□□ -0.81
PRIM1-208ENST00000552590 SP9P0CG40 484 aa9.99□□□□□ -0.81
PRIM1-208ENST00000552590 TRIM71Q2Q1W2 868 aaKnown RBP9.99□□□□□ -0.81
PRIM1-208ENST00000552590 BRDTQ58F21 947 aaPredicted RBP9.99□□□□□ -0.81
PRIM1-208ENST00000552590 LRSAM1Q6UWE0 723 aa9.99□□□□□ -0.81
PRIM1-208ENST00000552590 WWC1Q8IX03 1113 aa9.99□□□□□ -0.81
PRIM1-208ENST00000552590 PRPF38AQ8NAV1 312 aaKnown RBP9.99□□□□□ -0.81
PRIM1-208ENST00000552590 DYNLL2Q96FJ2 89 aa9.99□□□□□ -0.81
PRIM1-208ENST00000552590 S1PR5Q9H228 398 aa9.99□□□□□ -0.81
PRIM1-208ENST00000552590 CDH22Q9UJ99 828 aa9.99□□□□□ -0.81
PRIM1-208ENST00000552590 NR2E1Q9Y466 385 aa9.99□□□□□ -0.81
PRIM1-208ENST00000552590 A6NJR5 290 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 KPNA6O60684 536 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 CYP2D6P10635 497 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 PLEKHG4Q58EX7 1191 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 C6orf118Q5T5N4 469 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 KRTAP1-3Q8IUG1 177 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 WHAMMQ8TF30 809 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 ATP8B4Q8TF62 1192 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 COPS5Q92905 334 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 CLP1Q92989 425 aaKnown RBP9.98□□□□□ -0.81
PRIM1-208ENST00000552590 TLE6Q9H808 572 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 SLC38A10Q9HBR0 1119 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 COPRSQ9NQ92 184 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 PIH1D3Q9NQM4 214 aaKnown RBP9.98□□□□□ -0.81
PRIM1-208ENST00000552590 RWDD3Q9Y3V2 267 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms