RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 PDE12Q6L8Q7 609 aaKnown RBP13.33□□□□□ -0.28
GPN3-208ENST00000550974 AACSQ86V21 672 aa13.33□□□□□ -0.28
GPN3-208ENST00000550974 RASGRP4Q8TDF6 673 aa13.33□□□□□ -0.28
GPN3-208ENST00000550974 CASP10Q92851 521 aa13.33□□□□□ -0.28
GPN3-208ENST00000550974 EMID1Q96A84 441 aaPredicted RBP13.33□□□□□ -0.28
GPN3-208ENST00000550974 RANBP17Q9H2T7 1088 aaKnown RBP13.33□□□□□ -0.28
GPN3-208ENST00000550974 CYP26B1Q9NR63 512 aa13.33□□□□□ -0.28
GPN3-208ENST00000550974 TMEM260Q9NX78 707 aa13.33□□□□□ -0.28
GPN3-208ENST00000550974 PCDHB12Q9Y5F1 795 aa13.33□□□□□ -0.28
GPN3-208ENST00000550974 PLXNA4Q9HCM2 1894 aa13.33□□□□□ -0.28
GPN3-208ENST00000550974 FASNP49327 2511 aaKnown RBP13.32□□□□□ -0.28
GPN3-208ENST00000550974 KRBA1A5PL33 1030 aa13.32□□□□□ -0.28
GPN3-208ENST00000550974 FGF18O76093 207 aa13.32□□□□□ -0.28
GPN3-208ENST00000550974 SMIM10L2AP0DMW4 78 aa13.32□□□□□ -0.28
GPN3-208ENST00000550974 SMIM10L2BP0DMW5 78 aa13.32□□□□□ -0.28
GPN3-208ENST00000550974 GATMP50440 423 aa13.32□□□□□ -0.28
GPN3-208ENST00000550974 SBK1Q52WX2 424 aa13.32□□□□□ -0.28
GPN3-208ENST00000550974 FAM26DQ5JW98 314 aa13.32□□□□□ -0.28
GPN3-208ENST00000550974 RNPEPQ9H4A4 650 aa13.32□□□□□ -0.28
GPN3-208ENST00000550974 ZMIZ1Q9ULJ6 1067 aa13.32□□□□□ -0.28
GPN3-208ENST00000550974 KIAA1671Q9BY89 1806 aa13.32□□□□□ -0.28
GPN3-208ENST00000550974 POTEMA6NI47 508 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 FSCN2O14926 492 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 NARSO43776 548 aaKnown RBP13.31□□□□□ -0.28
GPN3-208ENST00000550974 PPFIA4O75335 1185 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 EOMESO95936 686 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 CHRNA1P02708 482 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 TSPY3P0CV98 308 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 TSPY8P0CW00 308 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 RARSP54136 660 aaKnown RBP13.31□□□□□ -0.28
GPN3-208ENST00000550974 POTEGQ6S5H5 508 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 THNSL1Q8IYQ7 743 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 SSH3Q8TE77 659 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 TCF25Q9BQ70 676 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 TBC1D17Q9HA65 648 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 CA14Q9ULX7 337 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 USTQ9Y2C2 406 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 MRVI1Q9Y6F6 885 aa13.31□□□□□ -0.28
GPN3-208ENST00000550974 HIDE1A8MVS5 230 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 SLC30A4O14863 429 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 SPTLC1O15269 473 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 IBSPP21815 317 aaPredicted RBP13.3□□□□□ -0.28
GPN3-208ENST00000550974 TGM1P22735 817 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 PMLP29590 882 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 HOXC8P31273 242 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 LPIN1Q14693 890 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 STXBP2Q15833 593 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 HSDL1Q3SXM5 330 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 ATAT1Q5SQI0 421 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 RARS2Q5T160 578 aaKnown RBP13.3□□□□□ -0.28
GPN3-208ENST00000550974 TTBK2Q6IQ55 1244 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 KANK3Q6NY19 840 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 NPAS4Q8IUM7 802 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 C12orf76Q8N812 135 aaPredicted RBP13.3□□□□□ -0.28
GPN3-208ENST00000550974 NEDD1Q8NHV4 660 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 ACSF2Q96CM8 615 aaPredicted RBP13.3□□□□□ -0.28
GPN3-208ENST00000550974 C16orf70Q9BSU1 422 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 EHMT1Q9H9B1 1298 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 KCNK12Q9HB15 430 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 ZNF287Q9HBT7 754 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 PARD6AQ9NPB6 346 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 ENTPD7Q9NQZ7 604 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 AAASQ9NRG9 546 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 SETD4Q9NVD3 440 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 WNT16Q9UBV4 365 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 SMG5Q9UPR3 1016 aaKnown RBP13.3□□□□□ -0.28
GPN3-208ENST00000550974 SIT1Q9Y3P8 196 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 HCFC2Q9Y5Z7 792 aa13.3□□□□□ -0.28
GPN3-208ENST00000550974 ASPMQ8IZT6 3477 aa13.29□□□□□ -0.28
GPN3-208ENST00000550974 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.29□□□□□ -0.28
GPN3-208ENST00000550974 ZNF316A6NFI3 1004 aaPredicted RBP13.29□□□□□ -0.28
GPN3-208ENST00000550974 H3BRB1 525 aa13.29□□□□□ -0.28
GPN3-208ENST00000550974 HOXD8P13378 290 aaPredicted RBP13.29□□□□□ -0.28
GPN3-208ENST00000550974 ATP8B2P98198 1209 aa13.29□□□□□ -0.28
GPN3-208ENST00000550974 XRRA1Q6P2D8 792 aa13.29□□□□□ -0.28
GPN3-208ENST00000550974 RUFY4Q6ZNE9 571 aa13.29□□□□□ -0.28
GPN3-208ENST00000550974 MAML2Q8IZL2 1156 aaPredicted RBP13.29□□□□□ -0.28
GPN3-208ENST00000550974 NETO1Q8TDF5 533 aa13.29□□□□□ -0.28
GPN3-208ENST00000550974 LINC01599Q8WXQ3 324 aa13.29□□□□□ -0.28
GPN3-208ENST00000550974 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
GPN3-208ENST00000550974 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.29□□□□□ -0.28
GPN3-208ENST00000550974 TUT1Q9H6E5 874 aaKnown RBP13.29□□□□□ -0.28
GPN3-208ENST00000550974 DLGAP2Q9P1A6 1054 aa13.29□□□□□ -0.28
GPN3-208ENST00000550974 STX8Q9UNK0 236 aa13.29□□□□□ -0.28
GPN3-208ENST00000550974 NOP58Q9Y2X3 529 aaKnown RBP13.29□□□□□ -0.28
GPN3-208ENST00000550974 SUPT16HQ9Y5B9 1047 aaKnown RBP13.29□□□□□ -0.28
GPN3-208ENST00000550974 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.29□□□□□ -0.28
GPN3-208ENST00000550974 GPR179Q6PRD1 2367 aa13.29□□□□□ -0.28
GPN3-208ENST00000550974 STAG3L1P0CL83 205 aa13.28□□□□□ -0.28
GPN3-208ENST00000550974 GNAT1P11488 350 aa13.28□□□□□ -0.28
GPN3-208ENST00000550974 TFAP4Q01664 338 aa13.28□□□□□ -0.28
GPN3-208ENST00000550974 N4BP2L1Q5TBK1 243 aaPredicted RBP13.28□□□□□ -0.28
GPN3-208ENST00000550974 SYDE2Q5VT97 1194 aa13.28□□□□□ -0.28
GPN3-208ENST00000550974 KIAA1841Q6NSI8 718 aa13.28□□□□□ -0.28
GPN3-208ENST00000550974 LRSAM1Q6UWE0 723 aa13.28□□□□□ -0.28
GPN3-208ENST00000550974 RTN4RL1Q86UN2 441 aaPredicted RBP13.28□□□□□ -0.28
GPN3-208ENST00000550974 ATRIPQ8WXE1 791 aa13.28□□□□□ -0.28
GPN3-208ENST00000550974 TAAR1Q96RJ0 339 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms