RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 RAB11FIP4Q86YS3 637 aa12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 PPM1EQ8WY54 764 aa12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 APBB2Q92870 758 aa12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 GLG1Q92896 1179 aa12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 MXRA8Q9BRK3 442 aa12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 SDF4Q9BRK5 362 aa12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 AZI2Q9H6S1 392 aa12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 BCAS3Q9H6U6 928 aa12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 JPH1Q9HDC5 661 aaPredicted RBP12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 LMCD1Q9NZU5 365 aa12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 THEGQ9P2T0 379 aa12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 INSL6Q9Y581 213 aa12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 MYO9BQ13459 2157 aa12.44□□□□□ -0.42
VTI1BP3-201ENST00000550220 ATP9AO75110 1047 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 ADAM17P78536 824 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 MRPS5P82675 430 aaKnown RBP12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 ARHGAP4P98171 946 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 AKAP17AQ02040 695 aaKnown RBP12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 SP4Q02446 784 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 TAP1Q03518 808 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 PPFIA1Q13136 1202 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 COL9A3Q14050 684 aaPredicted RBP12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 HIC1Q14526 733 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 AAK1Q2M2I8 961 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 CEP55Q53EZ4 464 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 PLEKHG4Q58EX7 1191 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 FAM26DQ5JW98 314 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 BLOC1S2Q6QNY1 142 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 USP38Q8NB14 1042 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 IL27Q8NEV9 243 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 DBF4BQ8NFT6 615 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 ARNTL2Q8WYA1 636 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 KCNH7Q9NS40 1196 aa12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 NAP1L2Q9ULW6 460 aaPredicted RBP12.43□□□□□ -0.42
VTI1BP3-201ENST00000550220 NFASCO94856 1347 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 CDH23Q9H251 3354 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 GSTTP1A0A1W2PQM5 241 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 GNA11P29992 359 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 ZNF76P36508 570 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 SLC26A2P50443 739 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 MBTPS1Q14703 1052 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 CCDC85BQ15834 202 aaPredicted RBP12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 PFKFB3Q16875 520 aaPredicted RBP12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 Q6ZUG5 572 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 NIPA1Q7RTP0 329 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 PLPPR4Q7Z2D5 763 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 LMBR1Q8WVP7 490 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 WNT8BQ93098 351 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 TCEANC2Q96MN5 208 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 JAKMIP1Q96N16 626 aaKnown RBP12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 C6orf50Q9HD87 102 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 FAM217BQ9NTX9 383 aaPredicted RBP12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 SLC9A2Q9UBY0 812 aa12.42□□□□□ -0.42
VTI1BP3-201ENST00000550220 ESYT2A0FGR8 921 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 STXBP3O00186 592 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 MEIS1O00470 390 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 PRPF3O43395 683 aaKnown RBP12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 NEFLP07196 543 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 CDC27P30260 824 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 SREBF1P36956 1147 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 DEFB103AP81534 67 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 SKAP1Q86WV1 359 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 TRIM50Q86XT4 487 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 BICD2Q8TD16 824 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 SAMD11Q96NU1 681 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 ASB2Q96Q27 587 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 TGS1Q96RS0 853 aaKnown RBP12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 ANO3Q9BYT9 981 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 COG5Q9UP83 839 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 MTCH2Q9Y6C9 303 aa12.41□□□□□ -0.42
VTI1BP3-201ENST00000550220 MBLAC1A4D2B0 266 aaPredicted RBP12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 CYP3A4P08684 503 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 SCG2P13521 617 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 RPS6KB1P23443 525 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 ADD1P35611 737 aaKnown RBP12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 CLK2P49760 499 aaKnown RBP12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 STAT5BP51692 787 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 ERVK-21P61565 698 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 GRIK4Q16099 956 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 IER5Q5VY09 327 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 TYW1BQ6NUM6 668 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 NME8Q8N427 588 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 CCDC148Q8NFR7 591 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 BRF1Q92994 677 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 TOP1MTQ969P6 601 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 AGXT2Q9BYV1 514 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 ZMYND12Q9H0C1 365 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 CERS4Q9HA82 394 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 AGO4Q9HCK5 861 aaKnown RBP12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 PKD2L1Q9P0L9 805 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 TUBE1Q9UJT0 475 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 SNX14Q9Y5W7 946 aa12.4□□□□□ -0.42
VTI1BP3-201ENST00000550220 M0QZ92 97 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 ATG7O95352 703 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 CTSHP09668 335 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 EVCP57679 992 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 ACTR2P61160 394 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 HTRA4P83105 476 aaPredicted RBP12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 SETQ01105 290 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms