RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 ZMYND8Q9ULU4 1186 aaPredicted RBP25.51■■□□□ 1.67
BRF1-216ENST00000550208 DCDC2CA8MYV0 355 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 H3BRB1 525 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 ATG7O95352 703 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 FAAP100Q0VG06 881 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 FAM47CQ5HY64 1035 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 NFRKBQ6P4R8 1299 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 SH3RF1Q7Z6J0 888 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 TRIM50Q86XT4 487 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 FAM126BQ8IXS8 530 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 PCYT2Q99447 389 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 RIT2Q99578 217 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 TRPV6Q9H1D0 765 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 TUT1Q9H6E5 874 aaKnown RBP25.5■■□□□ 1.67
BRF1-216ENST00000550208 PCDH10Q9P2E7 1040 aa25.5■■□□□ 1.67
BRF1-216ENST00000550208 H0YGN5 161 aa25.49■■□□□ 1.67
BRF1-216ENST00000550208 SYN1P17600 705 aa25.49■■□□□ 1.67
BRF1-216ENST00000550208 LRCH2Q5VUJ6 765 aa25.49■■□□□ 1.67
BRF1-216ENST00000550208 KATNAL1Q9BW62 490 aa25.49■■□□□ 1.67
BRF1-216ENST00000550208 PDE4DIPQ5VU43 2346 aa25.49■■□□□ 1.67
BRF1-216ENST00000550208 MROH7Q68CQ1 1323 aa25.48■■□□□ 1.67
BRF1-216ENST00000550208 GAS7O60861 476 aa25.48■■□□□ 1.67
BRF1-216ENST00000550208 LGR5O75473 907 aa25.48■■□□□ 1.67
BRF1-216ENST00000550208 PSMD10O75832 226 aa25.48■■□□□ 1.67
BRF1-216ENST00000550208 CD4P01730 458 aa25.48■■□□□ 1.67
BRF1-216ENST00000550208 ABHD15Q6UXT9 468 aa25.48■■□□□ 1.67
BRF1-216ENST00000550208 POTEDQ86YR6 584 aa25.48■■□□□ 1.67
BRF1-216ENST00000550208 HAS1Q92839 578 aa25.48■■□□□ 1.67
BRF1-216ENST00000550208 TEKT3Q9BXF9 490 aa25.48■■□□□ 1.67
BRF1-216ENST00000550208 KCNMB3Q9NPA1 279 aa25.48■■□□□ 1.67
BRF1-216ENST00000550208 HDAC6Q9UBN7 1215 aa25.48■■□□□ 1.67
BRF1-216ENST00000550208 DNAH12Q6ZR08 3092 aa25.47■■□□□ 1.67
BRF1-216ENST00000550208 B4GALT4O60513 344 aa25.47■■□□□ 1.67
BRF1-216ENST00000550208 CLTBP09497 229 aa25.47■■□□□ 1.67
BRF1-216ENST00000550208 KRT76Q01546 638 aa25.47■■□□□ 1.67
BRF1-216ENST00000550208 PTPN11Q06124 597 aaPredicted RBP25.47■■□□□ 1.67
BRF1-216ENST00000550208 ZNF174Q15697 407 aa25.47■■□□□ 1.67
BRF1-216ENST00000550208 ZNF746Q6NUN9 644 aaPredicted RBP25.47■■□□□ 1.67
BRF1-216ENST00000550208 C7orf31Q8N865 590 aa25.47■■□□□ 1.67
BRF1-216ENST00000550208 GLG1Q92896 1179 aa25.47■■□□□ 1.67
BRF1-216ENST00000550208 FAM20AQ96MK3 541 aa25.47■■□□□ 1.67
BRF1-216ENST00000550208 UNC45AQ9H3U1 944 aa25.47■■□□□ 1.67
BRF1-216ENST00000550208 RNPEPQ9H4A4 650 aa25.47■■□□□ 1.67
BRF1-216ENST00000550208 SMARCAD1Q9H4L7 1026 aa25.47■■□□□ 1.67
BRF1-216ENST00000550208 PRDM5Q9NQX1 630 aaPredicted RBP25.47■■□□□ 1.67
BRF1-216ENST00000550208 PDLIM7Q9NR12 457 aa25.47■■□□□ 1.67
BRF1-216ENST00000550208 TRMT13Q9NUP7 481 aaKnown RBP25.47■■□□□ 1.67
BRF1-216ENST00000550208 IGKV6D-21A0A0A0MT36 114 aa25.46■■□□□ 1.67
BRF1-216ENST00000550208 TRIM43BA6NCK2 446 aa25.46■■□□□ 1.67
BRF1-216ENST00000550208 TLR3O15455 904 aaKnown RBP25.46■■□□□ 1.67
BRF1-216ENST00000550208 MARCH6O60337 910 aa25.46■■□□□ 1.67
BRF1-216ENST00000550208 SUPT20HL2P0C7V6 817 aa25.46■■□□□ 1.67
BRF1-216ENST00000550208 SESTD1Q86VW0 696 aa25.46■■□□□ 1.67
BRF1-216ENST00000550208 TRIM43Q96BQ3 446 aaPredicted RBP25.46■■□□□ 1.67
BRF1-216ENST00000550208 TMEM39AQ9NV64 488 aa25.46■■□□□ 1.67
BRF1-216ENST00000550208 TBX3O15119 743 aa25.45■■□□□ 1.66
BRF1-216ENST00000550208 CHMP2AO43633 222 aa25.45■■□□□ 1.66
BRF1-216ENST00000550208 PDCP20941 246 aa25.45■■□□□ 1.66
BRF1-216ENST00000550208 SYT1P21579 422 aa25.45■■□□□ 1.66
BRF1-216ENST00000550208 MCM7P33993 719 aa25.45■■□□□ 1.66
BRF1-216ENST00000550208 TOB1P50616 345 aaPredicted RBP25.45■■□□□ 1.66
BRF1-216ENST00000550208 STAT5BP51692 787 aa25.45■■□□□ 1.66
BRF1-216ENST00000550208 GDF6Q6KF10 455 aaPredicted RBP25.45■■□□□ 1.66
BRF1-216ENST00000550208 SWSAP1Q6NVH7 229 aa25.45■■□□□ 1.66
BRF1-216ENST00000550208 MIS18BP1Q6P0N0 1132 aa25.45■■□□□ 1.66
BRF1-216ENST00000550208 SPRYD3Q8NCJ5 442 aa25.45■■□□□ 1.66
BRF1-216ENST00000550208 AZI2Q9H6S1 392 aa25.45■■□□□ 1.66
BRF1-216ENST00000550208 TCEAL9Q9UHQ7 104 aa25.45■■□□□ 1.66
BRF1-216ENST00000550208 ZNF215Q9UL58 517 aaPredicted RBP25.45■■□□□ 1.66
BRF1-216ENST00000550208 NOL7Q9UMY1 257 aaKnown RBP25.45■■□□□ 1.66
BRF1-216ENST00000550208 PCDHA10Q9Y5I2 948 aa25.45■■□□□ 1.66
BRF1-216ENST00000550208 BAG4O95429 457 aaKnown RBP25.44■■□□□ 1.66
BRF1-216ENST00000550208 MARK3P27448 753 aa25.44■■□□□ 1.66
BRF1-216ENST00000550208 HIC1Q14526 733 aa25.44■■□□□ 1.66
BRF1-216ENST00000550208 NBR1Q14596 966 aa25.44■■□□□ 1.66
BRF1-216ENST00000550208 TTC38Q5R3I4 469 aa25.44■■□□□ 1.66
BRF1-216ENST00000550208 B3GNT9Q6UX72 402 aa25.44■■□□□ 1.66
BRF1-216ENST00000550208 PLPPR4Q7Z2D5 763 aa25.44■■□□□ 1.66
BRF1-216ENST00000550208 SMAP1Q8IYB5 467 aaPredicted RBP25.44■■□□□ 1.66
BRF1-216ENST00000550208 TMEM60Q9H2L4 133 aa25.44■■□□□ 1.66
BRF1-216ENST00000550208 DISC1Q9NRI5 854 aa25.44■■□□□ 1.66
BRF1-216ENST00000550208 ERAP1Q9NZ08 941 aa25.44■■□□□ 1.66
BRF1-216ENST00000550208 GTF2IRD1Q9UHL9 959 aa25.44■■□□□ 1.66
BRF1-216ENST00000550208 SAMM50Q9Y512 469 aa25.44■■□□□ 1.66
BRF1-216ENST00000550208 EMSYQ7Z589 1322 aa25.43■■□□□ 1.66
BRF1-216ENST00000550208 VPS37CA5D8V6 355 aaPredicted RBP25.43■■□□□ 1.66
BRF1-216ENST00000550208 BACH1O14867 736 aa25.43■■□□□ 1.66
BRF1-216ENST00000550208 KIAA0355O15063 1070 aa25.43■■□□□ 1.66
BRF1-216ENST00000550208 PSAPP07602 524 aa25.43■■□□□ 1.66
BRF1-216ENST00000550208 HSP90AA1P07900 732 aaKnown RBP25.43■■□□□ 1.66
BRF1-216ENST00000550208 SMIM10L2AP0DMW4 78 aa25.43■■□□□ 1.66
BRF1-216ENST00000550208 SMIM10L2BP0DMW5 78 aa25.43■■□□□ 1.66
BRF1-216ENST00000550208 TRAPPC10P48553 1259 aa25.43■■□□□ 1.66
BRF1-216ENST00000550208 ZNF200P98182 395 aaPredicted RBP25.43■■□□□ 1.66
BRF1-216ENST00000550208 CALCRLQ16602 461 aa25.43■■□□□ 1.66
BRF1-216ENST00000550208 CCDC60Q8IWA6 550 aaPredicted RBP25.43■■□□□ 1.66
BRF1-216ENST00000550208 MTMR9Q96QG7 549 aa25.43■■□□□ 1.66
BRF1-216ENST00000550208 ZNF302Q9NR11 478 aa25.43■■□□□ 1.66
BRF1-216ENST00000550208 PRKAG2Q9UGJ0 569 aa25.43■■□□□ 1.66
BRF1-216ENST00000550208 TBX21Q9UL17 535 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms