RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 MAP4K2Q12851 820 aa6.83□□□□□ -1.32
CCDC38-208ENST00000549876 KLF10Q13118 480 aa6.83□□□□□ -1.32
CCDC38-208ENST00000549876 FXNQ16595 210 aa6.83□□□□□ -1.32
CCDC38-208ENST00000549876 RALYLQ86SE5 291 aaKnown RBP6.83□□□□□ -1.32
CCDC38-208ENST00000549876 GPR27Q9NS67 375 aa6.83□□□□□ -1.32
CCDC38-208ENST00000549876 IGSF5Q9NSI5 407 aa6.83□□□□□ -1.32
CCDC38-208ENST00000549876 PPARGC1AQ9UBK2 798 aaKnown RBP6.83□□□□□ -1.32
CCDC38-208ENST00000549876 FOXS1O43638 330 aa6.82□□□□□ -1.32
CCDC38-208ENST00000549876 CSF2RBP32927 897 aa6.82□□□□□ -1.32
CCDC38-208ENST00000549876 GRIN1Q05586 938 aa6.82□□□□□ -1.32
CCDC38-208ENST00000549876 TCTN3Q6NUS6 607 aa6.82□□□□□ -1.32
CCDC38-208ENST00000549876 OTOP3Q7RTS5 596 aa6.82□□□□□ -1.32
CCDC38-208ENST00000549876 KCND1Q9NSA2 647 aa6.82□□□□□ -1.32
CCDC38-208ENST00000549876 ING1Q9UK53 422 aaPredicted RBP6.82□□□□□ -1.32
CCDC38-208ENST00000549876 GJB6O95452 261 aa6.81□□□□□ -1.32
CCDC38-208ENST00000549876 CKMP06732 381 aa6.81□□□□□ -1.32
CCDC38-208ENST00000549876 FAHP16930 419 aa6.81□□□□□ -1.32
CCDC38-208ENST00000549876 DNAJA1P31689 397 aaKnown RBP6.81□□□□□ -1.32
CCDC38-208ENST00000549876 PPP2R2AP63151 447 aa6.81□□□□□ -1.32
CCDC38-208ENST00000549876 RBM12BQ8IXT5 1001 aaKnown RBP6.81□□□□□ -1.32
CCDC38-208ENST00000549876 SLC43A3Q8NBI5 491 aa6.81□□□□□ -1.32
CCDC38-208ENST00000549876 KCTD13Q8WZ19 329 aa6.81□□□□□ -1.32
CCDC38-208ENST00000549876 GNRHR2Q96P88 292 aa6.81□□□□□ -1.32
CCDC38-208ENST00000549876 GMLQ99445 158 aa6.81□□□□□ -1.32
CCDC38-208ENST00000549876 RBM25P49756 843 aaKnown RBP6.8□□□□□ -1.32
CCDC38-208ENST00000549876 TUSC3Q13454 348 aa6.8□□□□□ -1.32
CCDC38-208ENST00000549876 SKIDA1Q1XH10 827 aa6.8□□□□□ -1.32
CCDC38-208ENST00000549876 SLC10A6Q3KNW5 377 aa6.8□□□□□ -1.32
CCDC38-208ENST00000549876 PAN2Q504Q3 1202 aaKnown RBP6.8□□□□□ -1.32
CCDC38-208ENST00000549876 CRB2Q5IJ48 1285 aa6.8□□□□□ -1.32
CCDC38-208ENST00000549876 RSPO2Q6UXX9 243 aaPredicted RBP6.8□□□□□ -1.32
CCDC38-208ENST00000549876 CELF2-AS1Q8N7Q2 184 aa6.8□□□□□ -1.32
CCDC38-208ENST00000549876 UHMK1Q8TAS1 419 aaKnown RBP6.8□□□□□ -1.32
CCDC38-208ENST00000549876 KATNBL1Q9H079 304 aa6.8□□□□□ -1.32
CCDC38-208ENST00000549876 EPN3Q9H201 632 aa6.8□□□□□ -1.32
CCDC38-208ENST00000549876 ZFP69BQ9UJL9 534 aa6.8□□□□□ -1.32
CCDC38-208ENST00000549876 A0A1W2PQU0 124 aa6.79□□□□□ -1.32
CCDC38-208ENST00000549876 DLX3O60479 287 aa6.79□□□□□ -1.32
CCDC38-208ENST00000549876 LTFP02788 710 aa6.79□□□□□ -1.32
CCDC38-208ENST00000549876 HABP4Q5JVS0 413 aaKnown RBP6.79□□□□□ -1.32
CCDC38-208ENST00000549876 EEPD1Q7L9B9 569 aa6.79□□□□□ -1.32
CCDC38-208ENST00000549876 REXO1L1PQ8IX06 675 aa6.79□□□□□ -1.32
CCDC38-208ENST00000549876 STPG3Q8N7X2 389 aa6.79□□□□□ -1.32
CCDC38-208ENST00000549876 HNRNPLLQ8WVV9 542 aaKnown RBP6.79□□□□□ -1.32
CCDC38-208ENST00000549876 LMF1Q96S06 567 aa6.79□□□□□ -1.32
CCDC38-208ENST00000549876 TELO2Q9Y4R8 837 aa6.79□□□□□ -1.32
CCDC38-208ENST00000549876 FBXO21O94952 628 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 IL18BPO95998 194 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 ENO2P09104 434 aaPredicted RBP6.78□□□□□ -1.32
CCDC38-208ENST00000549876 PFKPQ01813 784 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 FOXE3Q13461 319 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 PRKD1Q15139 912 aaPredicted RBP6.78□□□□□ -1.32
CCDC38-208ENST00000549876 HS1BP3Q53T59 392 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 MIIPQ5JXC2 388 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 CD276Q5ZPR3 534 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 ANKS3Q6ZW76 656 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 GPR155Q7Z3F1 870 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 IER2Q9BTL4 223 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 PHF20Q9BVI0 1012 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 ST7Q9NRC1 585 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 ARHGAP20Q9P2F6 1191 aa6.78□□□□□ -1.32
CCDC38-208ENST00000549876 ZFR2Q9UPR6 939 aaKnown RBP6.78□□□□□ -1.32
CCDC38-208ENST00000549876 KLF4O43474 513 aa6.77□□□□□ -1.33
CCDC38-208ENST00000549876 GLRBP48167 497 aa6.77□□□□□ -1.33
CCDC38-208ENST00000549876 ZNF503Q96F45 646 aa6.77□□□□□ -1.33
CCDC38-208ENST00000549876 LRRC37BQ96QE4 947 aa6.77□□□□□ -1.33
CCDC38-208ENST00000549876 ZNF839A8K0R7 811 aa6.76□□□□□ -1.33
CCDC38-208ENST00000549876 NPIPB8E9PQR5 432 aa6.76□□□□□ -1.33
CCDC38-208ENST00000549876 EPHA5P54756 1037 aa6.76□□□□□ -1.33
CCDC38-208ENST00000549876 LBX2Q6XYB7 198 aa6.76□□□□□ -1.33
CCDC38-208ENST00000549876 RNF207Q6ZRF8 634 aa6.76□□□□□ -1.33
CCDC38-208ENST00000549876 USP53Q70EK8 1073 aa6.76□□□□□ -1.33
CCDC38-208ENST00000549876 TAX1BP1Q86VP1 789 aa6.76□□□□□ -1.33
CCDC38-208ENST00000549876 IFNL2Q8IZJ0 200 aa6.76□□□□□ -1.33
CCDC38-208ENST00000549876 EDAQ92838 391 aa6.76□□□□□ -1.33
CCDC38-208ENST00000549876 NEIL1Q96FI4 390 aaPredicted RBP6.76□□□□□ -1.33
CCDC38-208ENST00000549876 ZNF341Q9BYN7 854 aa6.76□□□□□ -1.33
CCDC38-208ENST00000549876 PTPN22Q9Y2R2 807 aa6.76□□□□□ -1.33
CCDC38-208ENST00000549876 H0Y858 1186 aa6.75□□□□□ -1.33
CCDC38-208ENST00000549876 AGRPO00253 132 aa6.75□□□□□ -1.33
CCDC38-208ENST00000549876 NKRFO15226 690 aaKnown RBP eCLIP6.75□□□□□ -1.33
CCDC38-208ENST00000549876 ZNF888P0CJ79 500 aaPredicted RBP6.75□□□□□ -1.33
CCDC38-208ENST00000549876 COL6A2P12110 1019 aa6.75□□□□□ -1.33
CCDC38-208ENST00000549876 GRK2P25098 689 aa6.75□□□□□ -1.33
CCDC38-208ENST00000549876 GRK3P35626 688 aa6.75□□□□□ -1.33
CCDC38-208ENST00000549876 USP10Q14694 798 aaKnown RBP6.75□□□□□ -1.33
CCDC38-208ENST00000549876 DDR2Q16832 855 aa6.75□□□□□ -1.33
CCDC38-208ENST00000549876 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.75□□□□□ -1.33
CCDC38-208ENST00000549876 GIMAP8Q8ND71 665 aaPredicted RBP6.75□□□□□ -1.33
CCDC38-208ENST00000549876 ADOQ96SZ5 270 aa6.75□□□□□ -1.33
CCDC38-208ENST00000549876 NUB1Q9Y5A7 615 aa6.75□□□□□ -1.33
CCDC38-208ENST00000549876 ACOT7O00154 380 aa6.74□□□□□ -1.33
CCDC38-208ENST00000549876 PLSCR1O15162 318 aa6.74□□□□□ -1.33
CCDC38-208ENST00000549876 SPIRE1Q08AE8 756 aa6.74□□□□□ -1.33
CCDC38-208ENST00000549876 KIZQ2M2Z5 673 aa6.74□□□□□ -1.33
CCDC38-208ENST00000549876 AGBL4Q5VU57 503 aa6.74□□□□□ -1.33
CCDC38-208ENST00000549876 IGFL4Q6B9Z1 124 aa6.74□□□□□ -1.33
CCDC38-208ENST00000549876 FUKQ8N0W3 1084 aa6.74□□□□□ -1.33
CCDC38-208ENST00000549876 GNAT1P11488 350 aa6.73□□□□□ -1.33
CCDC38-208ENST00000549876 FHL2Q14192 279 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms