RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 STMN4Q9H169 189 aaPredicted RBP17.77■□□□□ 0.43
CUX1-213ENST00000549414 EPB41L5Q9HCM4 733 aa17.77■□□□□ 0.43
CUX1-213ENST00000549414 CNTNAP4Q9C0A0 1308 aa17.77■□□□□ 0.43
CUX1-213ENST00000549414 NPHP3-ACAD11A0A0J9YXS1 232 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 ASNSP08243 561 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 ZSCAN26Q16670 478 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 CDC42EP5Q6NZY7 148 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 TMED8Q6PL24 325 aaPredicted RBP17.76■□□□□ 0.43
CUX1-213ENST00000549414 RAVER2Q9HCJ3 691 aaKnown RBP17.76■□□□□ 0.43
CUX1-213ENST00000549414 ABCB6Q9NP58 842 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 ZBTB12Q9Y330 459 aaPredicted RBP17.76■□□□□ 0.43
CUX1-213ENST00000549414 HEXIM1O94992 359 aaKnown RBP17.76■□□□□ 0.43
CUX1-213ENST00000549414 PNMA6AP0CW24 399 aaPredicted RBP17.76■□□□□ 0.43
CUX1-213ENST00000549414 PDHBP11177 359 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 IRX5P78411 483 aaPredicted RBP17.76■□□□□ 0.43
CUX1-213ENST00000549414 AP3B2Q13367 1082 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 CCDC151A5D8V7 595 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 ILDR1Q86SU0 546 aaPredicted RBP17.76■□□□□ 0.43
CUX1-213ENST00000549414 NSRP1Q9H0G5 558 aaKnown RBP17.76■□□□□ 0.43
CUX1-213ENST00000549414 RGL1Q9NZL6 768 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 KSR1Q8IVT5 923 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 TAB3Q8N5C8 712 aaPredicted RBP17.76■□□□□ 0.43
CUX1-213ENST00000549414 TRIM6Q9C030 488 aaPredicted RBP17.76■□□□□ 0.43
CUX1-213ENST00000549414 UBE2TQ9NPD8 197 aaPredicted RBP17.76■□□□□ 0.43
CUX1-213ENST00000549414 KMT5AQ9NQR1 393 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 ANAPC4Q9UJX5 808 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 JRKLQ9Y4A0 524 aa17.76■□□□□ 0.43
CUX1-213ENST00000549414 FERP16591 822 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 PDE6CP51160 858 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 GFPT1Q06210 699 aaPredicted RBP17.75■□□□□ 0.43
CUX1-213ENST00000549414 MTERF2Q49AM1 385 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 ALKBH5Q6P6C2 394 aaKnown RBP17.75■□□□□ 0.43
CUX1-213ENST00000549414 DYDC2Q96IM9 177 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 MAK16Q9BXY0 300 aaKnown RBP17.75■□□□□ 0.43
CUX1-213ENST00000549414 PPANQ9NQ55 473 aaKnown RBP17.75■□□□□ 0.43
CUX1-213ENST00000549414 FAN1Q9Y2M0 1017 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 ABCB11O95342 1321 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 PVALEFA0A1B0GWK0 134 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 PEX3P56589 373 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 MAP3K14Q99558 947 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 CCSER1Q9C0I3 900 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 BCL9O00512 1426 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 DCCP43146 1447 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 SEC23AQ15436 765 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 C16orf86Q6ZW13 317 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 RASGRP2Q7LDG7 609 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 CRAMP1Q96RY5 1269 aa17.75■□□□□ 0.43
CUX1-213ENST00000549414 ADD3Q9UEY8 706 aaKnown RBP17.75■□□□□ 0.43
CUX1-213ENST00000549414 A0A1B0GTH6 734 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 KCNH2Q12809 1159 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 RNF169Q8NCN4 708 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 SERPING1P05155 500 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 R3HDM1Q15032 1099 aaKnown RBP17.74■□□□□ 0.43
CUX1-213ENST00000549414 RUFY4Q6ZNE9 571 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 FERMT1Q9BQL6 677 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.74■□□□□ 0.43
CUX1-213ENST00000549414 ADSSL1Q8N142 457 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 BZW2Q9Y6E2 419 aaKnown RBP17.74■□□□□ 0.43
CUX1-213ENST00000549414 N4BP1O75113 896 aaKnown RBP17.74■□□□□ 0.43
CUX1-213ENST00000549414 NDUFB10O96000 172 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 GNGT1P63211 74 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 ANKS4BQ8N8V4 417 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 TC2NQ8N9U0 490 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 ATP6V0A1Q93050 837 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 CCDC97Q96F63 343 aaPredicted RBP17.74■□□□□ 0.43
CUX1-213ENST00000549414 FAM204AQ9H8W3 233 aa17.74■□□□□ 0.43
CUX1-213ENST00000549414 MXI1P50539 228 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 EARS2Q5JPH6 523 aaKnown RBP17.73■□□□□ 0.43
CUX1-213ENST00000549414 CAPN12Q6ZSI9 719 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 RTKN2Q8IZC4 609 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 NT5C1BQ96P26 610 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 ACCSQ96QU6 501 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 UBR1Q8IWV7 1749 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 FAM160B2Q86V87 743 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 GUF1Q8N442 669 aaKnown RBP17.73■□□□□ 0.43
CUX1-213ENST00000549414 VGLL2Q8N8G2 317 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 MGARPQ8TDB4 240 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 AGPAT5Q9NUQ2 364 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 POLLQ9UGP5 575 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 GPR75-ASB3A0A0A6YYF3 556 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 NR3C1P04150 777 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 ATF7P17544 494 aaPredicted RBP17.73■□□□□ 0.43
CUX1-213ENST00000549414 TNS2Q63HR2 1409 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 RAD9BQ6WBX8 426 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 CCDC63Q8NA47 563 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 AP1M1Q9BXS5 423 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 PTPN22Q9Y2R2 807 aa17.73■□□□□ 0.43
CUX1-213ENST00000549414 MYMKA6NI61 221 aa17.72■□□□□ 0.43
CUX1-213ENST00000549414 NCK2O43639 380 aa17.72■□□□□ 0.43
CUX1-213ENST00000549414 NFIAQ12857 509 aa17.72■□□□□ 0.43
CUX1-213ENST00000549414 SPP2Q13103 211 aa17.72■□□□□ 0.43
CUX1-213ENST00000549414 GSPT2Q8IYD1 628 aaKnown RBP17.72■□□□□ 0.43
CUX1-213ENST00000549414 RMDN3Q96TC7 470 aa17.72■□□□□ 0.43
CUX1-213ENST00000549414 RAB17Q9H0T7 212 aa17.72■□□□□ 0.43
CUX1-213ENST00000549414 CDAN1Q8IWY9 1227 aa17.72■□□□□ 0.43
CUX1-213ENST00000549414 SLC7A3Q8WY07 619 aa17.72■□□□□ 0.43
CUX1-213ENST00000549414 SAMD15Q9P1V8 674 aa17.72■□□□□ 0.43
CUX1-213ENST00000549414 E7EVH7 732 aa17.72■□□□□ 0.43
CUX1-213ENST00000549414 ZBTB16Q05516 673 aa17.72■□□□□ 0.43
CUX1-213ENST00000549414 NR1I3Q14994 352 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms