RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	EPHA7	Q15375	998 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	E2F4	Q16254	413 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	LY6K	Q17RY6	165 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	HYI	Q5T013	277 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	METTL7B	Q6UX53	244 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	CYFIP1	Q7L576	1253 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	RDM1	Q8NG50	284 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	RASSF8	Q8NHQ8	419 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	TRIB2	Q92519	343 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	CALML4	Q96GE6	196 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	TIGD1	Q96MW7	591 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	BCAS3	Q9H6U6	928 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	USP25	Q9UHP3	1055 aa		13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.73	□□□□□ -0.21
ERBB3-208	ENST00000549205	DNAH12	Q6ZR08	3092 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	MED24	O75448	989 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	FARP2	O94887	1054 aa	Predicted RBP	13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	GGPS1	O95749	300 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	SPATA31C1	P0DKV0	1188 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	PLCG1	P19174	1290 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	RPA1	P27694	616 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	ADCYAP1R1	P41586	468 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	STAT6	P42226	847 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	ACTR2	P61160	394 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	ZRSR1	Q15695	479 aa	Known RBP	13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	CCDC144B	Q3MJ40	725 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	TMEM119	Q4V9L6	283 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	CELF3	Q5SZQ8	465 aa	Known RBP	13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	MFSD14C	Q5VZR4	134 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	IQSEC1	Q6DN90	963 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	CAVIN1	Q6NZI2	390 aa	Known RBP	13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	IQUB	Q8NA54	791 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	NEK9	Q8TD19	979 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	SYAP1	Q96A49	352 aa	Predicted RBP	13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	DHX58	Q96C10	678 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	CDK5RAP3	Q96JB5	506 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	PNMA5	Q96PV4	448 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	HSD17B14	Q9BPX1	270 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	CLSTN2	Q9H4D0	955 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	TUFT1	Q9NNX1	390 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	NRBP1	Q9UHY1	535 aa		13.72	□□□□□ -0.21
ERBB3-208	ENST00000549205	POTEB3	A0JP26	581 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	ACTN4	O43707	911 aa	Known RBP	13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	SORBS3	O60504	671 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	GH1	P01241	217 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	SLFN14	P0C7P3	912 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	MUT	P22033	750 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	PRMT2	P55345	433 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	ECM1	Q16610	540 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	LONRF3	Q496Y0	759 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	NAALADL2	Q58DX5	795 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	PRAMEF19	Q5SWL8	479 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	CCDC183	Q5T5S1	534 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	RRAGB	Q5VZM2	374 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	PDXDC2P	Q6P474	469 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	POTEB	Q6S5H4	581 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	KRBA2	Q6ZNG9	492 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	CATSPER3	Q86XQ3	398 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	DHX37	Q8IY37	1157 aa	Known RBP	13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	KCTD17	Q8N5Z5	321 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	DYDC2	Q96IM9	177 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	PLIN2	Q99541	437 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	NT5C3A	Q9H0P0	336 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	NUP62CL	Q9H1M0	184 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	CUEDC2	Q9H467	287 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	MLXIP	Q9HAP2	919 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	RGL1	Q9NZL6	768 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	TMEM63C	Q9P1W3	806 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	STK17A	Q9UEE5	414 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	SERTAD1	Q9UHV2	236 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	SAMM50	Q9Y512	469 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	PCDHA10	Q9Y5I2	948 aa		13.71	□□□□□ -0.21
ERBB3-208	ENST00000549205	EVPL	Q92817	2033 aa		13.71	□□□□□ -0.22
ERBB3-208	ENST00000549205	FRMPD3	Q5JV73	1810 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	POTEF	A5A3E0	1075 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	NKRF	O15226	690 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	ADCY3	O60266	1144 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	SLITRK3	O94933	977 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	ATG7	O95352	703 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	P4HB	P07237	508 aa	Known RBP	13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	PSAP	P07602	524 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	SP4	Q02446	784 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	CYP4A11	Q02928	519 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	ARHGAP1	Q07960	439 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	DUSP28	Q4G0W2	176 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	TMEM63B	Q5T3F8	832 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	KANK3	Q6NY19	840 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	MIS18BP1	Q6P0N0	1132 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	POTEG	Q6S5H5	508 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	ABHD15	Q6UXT9	468 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	CEP57L1	Q8IYX8	460 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	CNNM3	Q8NE01	707 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	RAET1E	Q8TD07	263 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	LRRC15	Q8TF66	581 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	COPS5	Q92905	334 aa		13.7	□□□□□ -0.22
ERBB3-208	ENST00000549205	EMID1	Q96A84	441 aa	Predicted RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms