RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 WDR64B1ANS9 1081 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 GGPS1O95749 300 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 CCNE2O96020 404 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 RDM1Q8NG50 284 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 TRIB2Q92519 343 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 SYAP1Q96A49 352 aaPredicted RBP32.29■■■□□ 2.76
BRF1-213ENST00000548421 BCAS3Q9H6U6 928 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 FARP2O94887 1054 aaPredicted RBP32.29■■■□□ 2.76
BRF1-213ENST00000548421 RPA1P27694 616 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 HYIQ5T013 277 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 RRAGBQ5VZM2 374 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 MFSD14CQ5VZR4 134 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 CAVIN1Q6NZI2 390 aaKnown RBP32.29■■■□□ 2.76
BRF1-213ENST00000548421 METTL7BQ6UX53 244 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 IQUBQ8NA54 791 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 DHX58Q96C10 678 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 TIGD1Q96MW7 591 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 POLR3CQ9BUI4 534 aaPredicted RBP32.29■■■□□ 2.76
BRF1-213ENST00000548421 USP25Q9UHP3 1055 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 SAMM50Q9Y512 469 aa32.29■■■□□ 2.76
BRF1-213ENST00000548421 ADCYAP1R1P41586 468 aa32.28■■■□□ 2.76
BRF1-213ENST00000548421 GRB10Q13322 594 aa32.28■■■□□ 2.76
BRF1-213ENST00000548421 E2F4Q16254 413 aa32.28■■■□□ 2.76
BRF1-213ENST00000548421 CELF3Q5SZQ8 465 aaKnown RBP32.28■■■□□ 2.76
BRF1-213ENST00000548421 NEK9Q8TD19 979 aa32.28■■■□□ 2.76
BRF1-213ENST00000548421 NT5C3AQ9H0P0 336 aa32.28■■■□□ 2.76
BRF1-213ENST00000548421 MLXIPQ9HAP2 919 aa32.28■■■□□ 2.76
BRF1-213ENST00000548421 NRBP1Q9UHY1 535 aa32.28■■■□□ 2.76
BRF1-213ENST00000548421 SORBS3O60504 671 aa32.27■■■□□ 2.76
BRF1-213ENST00000548421 MED24O75448 989 aa32.27■■■□□ 2.76
BRF1-213ENST00000548421 PLCG1P19174 1290 aa32.27■■■□□ 2.76
BRF1-213ENST00000548421 STAT6P42226 847 aa32.27■■■□□ 2.76
BRF1-213ENST00000548421 PRMT2P55345 433 aa32.27■■■□□ 2.76
BRF1-213ENST00000548421 LONRF3Q496Y0 759 aa32.27■■■□□ 2.76
BRF1-213ENST00000548421 PRAMEF19Q5SWL8 479 aa32.27■■■□□ 2.76
BRF1-213ENST00000548421 IQSEC1Q6DN90 963 aa32.27■■■□□ 2.76
BRF1-213ENST00000548421 CATSPER3Q86XQ3 398 aa32.27■■■□□ 2.76
BRF1-213ENST00000548421 PNMA5Q96PV4 448 aa32.27■■■□□ 2.76
BRF1-213ENST00000548421 HSD17B14Q9BPX1 270 aa32.27■■■□□ 2.76
BRF1-213ENST00000548421 TUFT1Q9NNX1 390 aa32.27■■■□□ 2.76
BRF1-213ENST00000548421 ZNF865P0CJ78 1059 aaPredicted RBP32.26■■■□□ 2.75
BRF1-213ENST00000548421 ACTR2P61160 394 aa32.26■■■□□ 2.75
BRF1-213ENST00000548421 SP4Q02446 784 aa32.26■■■□□ 2.75
BRF1-213ENST00000548421 CCDC144BQ3MJ40 725 aa32.26■■■□□ 2.75
BRF1-213ENST00000548421 TMEM119Q4V9L6 283 aa32.26■■■□□ 2.75
BRF1-213ENST00000548421 KRBA2Q6ZNG9 492 aa32.26■■■□□ 2.75
BRF1-213ENST00000548421 DHX37Q8IY37 1157 aaKnown RBP32.26■■■□□ 2.75
BRF1-213ENST00000548421 PLIN2Q99541 437 aa32.26■■■□□ 2.75
BRF1-213ENST00000548421 TMEM63CQ9P1W3 806 aa32.26■■■□□ 2.75
BRF1-213ENST00000548421 PCDHA10Q9Y5I2 948 aa32.26■■■□□ 2.75
BRF1-213ENST00000548421 POTEB3A0JP26 581 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 ACTN4O43707 911 aaKnown RBP32.25■■■□□ 2.75
BRF1-213ENST00000548421 SPATA31C1P0DKV0 1188 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 CYP4A11Q02928 519 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 ECM1Q16610 540 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 CCDC183Q5T5S1 534 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 POTEBQ6S5H4 581 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 CNNM3Q8NE01 707 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 RAET1EQ8TD07 263 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 DYDC2Q96IM9 177 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 NUP62CLQ9H1M0 184 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 CLSTN2Q9H4D0 955 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 RGL1Q9NZL6 768 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 SERTAD1Q9UHV2 236 aa32.25■■■□□ 2.75
BRF1-213ENST00000548421 C11orf97A0A1B0GVM6 126 aaPredicted RBP32.24■■■□□ 2.75
BRF1-213ENST00000548421 NKRFO15226 690 aaKnown RBP eCLIP32.24■■■□□ 2.75
BRF1-213ENST00000548421 MUTP22033 750 aa32.24■■■□□ 2.75
BRF1-213ENST00000548421 DUSP28Q4G0W2 176 aa32.24■■■□□ 2.75
BRF1-213ENST00000548421 TMEM63BQ5T3F8 832 aa32.24■■■□□ 2.75
BRF1-213ENST00000548421 CEP57L1Q8IYX8 460 aa32.24■■■□□ 2.75
BRF1-213ENST00000548421 COPS5Q92905 334 aa32.24■■■□□ 2.75
BRF1-213ENST00000548421 SLITRK3O94933 977 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 GH1P01241 217 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 P4HBP07237 508 aaKnown RBP32.23■■■□□ 2.75
BRF1-213ENST00000548421 SLFN14P0C7P3 912 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 NAALADL2Q58DX5 795 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 MIS18BP1Q6P0N0 1132 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 CUEDC2Q9H467 287 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 STK17AQ9UEE5 414 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 KIAA1024Q9UPX6 916 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 ADCY3O60266 1144 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 PSAPP07602 524 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 SMPD1P17405 629 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 TNFAIP2Q03169 654 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 LAMC2Q13753 1193 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 ABHD15Q6UXT9 468 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 KCTD17Q8N5Z5 321 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 EMID1Q96A84 441 aaPredicted RBP32.23■■■□□ 2.75
BRF1-213ENST00000548421 CCDC34Q96HJ3 373 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 LXNQ9BS40 222 aa32.23■■■□□ 2.75
BRF1-213ENST00000548421 LOXHD1Q8IVV2 1947 aa32.22■■■□□ 2.75
BRF1-213ENST00000548421 MYH9P35579 1960 aaKnown RBP32.22■■■□□ 2.75
BRF1-213ENST00000548421 POTEFA5A3E0 1075 aa32.22■■■□□ 2.75
BRF1-213ENST00000548421 ATG7O95352 703 aa32.22■■■□□ 2.75
BRF1-213ENST00000548421 ARHGAP1Q07960 439 aa32.22■■■□□ 2.75
BRF1-213ENST00000548421 CTTNQ14247 550 aaKnown RBP32.22■■■□□ 2.75
BRF1-213ENST00000548421 KANK3Q6NY19 840 aa32.22■■■□□ 2.75
BRF1-213ENST00000548421 PDXDC2PQ6P474 469 aa32.22■■■□□ 2.75
BRF1-213ENST00000548421 POTEGQ6S5H5 508 aa32.22■■■□□ 2.75
BRF1-213ENST00000548421 TPH2Q8IWU9 490 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms