RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 TMOD2Q9NZR1 351 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 CRIM1Q9NZV1 1036 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 EGFL7Q9UHF1 273 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 PPP1R9AQ9ULJ8 1098 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 CHD9Q3L8U1 2897 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 MAST2Q6P0Q8 1798 aa8.48□□□□□ -1.05
CCDC59-203ENST00000548126 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.47□□□□□ -1.05
CCDC59-203ENST00000548126 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.47□□□□□ -1.05
CCDC59-203ENST00000548126 CARNS1A5YM72 827 aa8.47□□□□□ -1.05
CCDC59-203ENST00000548126 CHL1O00533 1208 aa8.47□□□□□ -1.05
CCDC59-203ENST00000548126 NDUFB5O43674 189 aa8.47□□□□□ -1.05
CCDC59-203ENST00000548126 CPNE3O75131 537 aaKnown RBP8.47□□□□□ -1.05
CCDC59-203ENST00000548126 XRCC5P13010 732 aaKnown RBP8.47□□□□□ -1.05
CCDC59-203ENST00000548126 CYP2B6P20813 491 aa8.47□□□□□ -1.05
CCDC59-203ENST00000548126 PPP2R1AP30153 589 aa8.47□□□□□ -1.05
CCDC59-203ENST00000548126 CACNB2Q08289 660 aaPredicted RBP8.47□□□□□ -1.05
CCDC59-203ENST00000548126 CCDC85BQ15834 202 aaPredicted RBP8.47□□□□□ -1.05
CCDC59-203ENST00000548126 SMYD4Q8IYR2 804 aaPredicted RBP8.47□□□□□ -1.05
CCDC59-203ENST00000548126 PLD6Q8N2A8 252 aaKnown RBP8.47□□□□□ -1.05
CCDC59-203ENST00000548126 TDRD7Q8NHU6 1098 aaKnown RBP8.47□□□□□ -1.05
CCDC59-203ENST00000548126 HRASLS5Q96KN8 279 aa8.47□□□□□ -1.05
CCDC59-203ENST00000548126 RNPC3Q96LT9 517 aaKnown RBP8.47□□□□□ -1.05
CCDC59-203ENST00000548126 PNNQ9H307 717 aaKnown RBP8.47□□□□□ -1.05
CCDC59-203ENST00000548126 PHAXQ9H814 394 aaKnown RBP8.47□□□□□ -1.05
CCDC59-203ENST00000548126 AFG3L2Q9Y4W6 797 aa8.47□□□□□ -1.05
CCDC59-203ENST00000548126 ZHX2Q9Y6X8 837 aa8.47□□□□□ -1.05
CCDC59-203ENST00000548126 PLXNB2O15031 1838 aa8.47□□□□□ -1.05
CCDC59-203ENST00000548126 TMPRSS2O15393 492 aa8.46□□□□□ -1.06
CCDC59-203ENST00000548126 CD8BP10966 210 aa8.46□□□□□ -1.06
CCDC59-203ENST00000548126 CCND3P30281 292 aaPredicted RBP8.46□□□□□ -1.06
CCDC59-203ENST00000548126 RIPK4P57078 832 aa8.46□□□□□ -1.06
CCDC59-203ENST00000548126 CDK5R2Q13319 367 aa8.46□□□□□ -1.06
CCDC59-203ENST00000548126 ZNF211Q13398 564 aaPredicted RBP8.46□□□□□ -1.06
CCDC59-203ENST00000548126 PHLDB3Q6NSJ2 640 aa8.46□□□□□ -1.06
CCDC59-203ENST00000548126 GLIS3Q8NEA6 775 aa8.46□□□□□ -1.06
CCDC59-203ENST00000548126 TIFAQ96CG3 184 aa8.46□□□□□ -1.06
CCDC59-203ENST00000548126 MRIQ9BWK5 157 aa8.46□□□□□ -1.06
CCDC59-203ENST00000548126 KRT82Q9NSB4 513 aa8.46□□□□□ -1.06
CCDC59-203ENST00000548126 GNEQ9Y223 722 aaKnown RBP8.46□□□□□ -1.06
CCDC59-203ENST00000548126 ATP11BQ9Y2G3 1177 aa8.46□□□□□ -1.06
CCDC59-203ENST00000548126 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.46□□□□□ -1.06
CCDC59-203ENST00000548126 MAPK8IP3Q9UPT6 1336 aa8.46□□□□□ -1.06
CCDC59-203ENST00000548126 RPAP1Q9BWH6 1393 aaPredicted RBP8.46□□□□□ -1.06
CCDC59-203ENST00000548126 CFAP54Q96N23 3096 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 USP34Q70CQ2 3546 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 PTPRFP10586 1907 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 SMIM22K7EJ46 135 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 GCLCP48506 637 aaPredicted RBP8.45□□□□□ -1.06
CCDC59-203ENST00000548126 AAK1Q2M2I8 961 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 APOBEC3HQ6NTF7 200 aaKnown RBP8.45□□□□□ -1.06
CCDC59-203ENST00000548126 FAM181AQ8N9Y4 354 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 FAM151AQ8WW52 585 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 TEKT1Q969V4 418 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 ZDHHC15Q96MV8 337 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 FANCD2OSQ96PS1 177 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 PRDM12Q9H4Q4 367 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 ANO2Q9NQ90 1003 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 PRDM5Q9NQX1 630 aaPredicted RBP8.45□□□□□ -1.06
CCDC59-203ENST00000548126 PICK1Q9NRD5 415 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 AGTPBP1Q9UPW5 1226 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 CHD7Q9P2D1 2997 aa8.45□□□□□ -1.06
CCDC59-203ENST00000548126 RNGTTO60942 597 aaKnown RBP8.44□□□□□ -1.06
CCDC59-203ENST00000548126 IGKV5-2P06315 115 aa8.44□□□□□ -1.06
CCDC59-203ENST00000548126 CSF1RP07333 972 aa8.44□□□□□ -1.06
CCDC59-203ENST00000548126 RNASE1P07998 156 aaKnown RBP8.44□□□□□ -1.06
CCDC59-203ENST00000548126 ZKSCAN1P17029 563 aaPredicted RBP8.44□□□□□ -1.06
CCDC59-203ENST00000548126 LIG1P18858 919 aa8.44□□□□□ -1.06
CCDC59-203ENST00000548126 ZNF124Q15973 351 aa8.44□□□□□ -1.06
CCDC59-203ENST00000548126 SLC39A5Q6ZMH5 540 aa8.44□□□□□ -1.06
CCDC59-203ENST00000548126 WFDC3Q8IUB2 231 aa8.44□□□□□ -1.06
CCDC59-203ENST00000548126 SCYL3Q8IZE3 742 aa8.44□□□□□ -1.06
CCDC59-203ENST00000548126 NPHS2Q9NP85 383 aa8.44□□□□□ -1.06
CCDC59-203ENST00000548126 MBNL3Q9NUK0 354 aaKnown RBP8.44□□□□□ -1.06
CCDC59-203ENST00000548126 PCOLCE2Q9UKZ9 415 aa8.44□□□□□ -1.06
CCDC59-203ENST00000548126 LAS1LQ9Y4W2 734 aaKnown RBP8.44□□□□□ -1.06
CCDC59-203ENST00000548126 RLFQ13129 1914 aa8.44□□□□□ -1.06
CCDC59-203ENST00000548126 TRIM43BA6NCK2 446 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 FAM86C2PA6NEL3 165 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 DNM1LO00429 736 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 DDX58O95786 925 aaKnown RBP8.43□□□□□ -1.06
CCDC59-203ENST00000548126 HIBADHP31937 336 aaKnown RBP8.43□□□□□ -1.06
CCDC59-203ENST00000548126 NHLH1Q02575 133 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 TFF2Q03403 129 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 PPP2R3AQ06190 1150 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 LMOD3Q0VAK6 560 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 TREML2Q5T2D2 321 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 GLYCTKQ8IVS8 523 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 LPAR1Q92633 364 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 TRIM43Q96BQ3 446 aaPredicted RBP8.43□□□□□ -1.06
CCDC59-203ENST00000548126 CITED4Q96RK1 184 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 PLA2G12BQ9BX93 195 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 DNAJC25Q9H1X3 360 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 CCDC86Q9H6F5 360 aaKnown RBP8.43□□□□□ -1.06
CCDC59-203ENST00000548126 SSU72Q9NP77 194 aaKnown RBP8.43□□□□□ -1.06
CCDC59-203ENST00000548126 PPP4R2Q9NY27 417 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 FAM53CQ9NYF3 392 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 FRMPD3Q5JV73 1810 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 PLXNA1Q9UIW2 1896 aa8.43□□□□□ -1.06
CCDC59-203ENST00000548126 ANKRD18BA2A2Z9 1011 aa8.42□□□□□ -1.06
CCDC59-203ENST00000548126 TRIM75PA6NK02 468 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms