RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 POLR3CQ9BUI4 534 aaPredicted RBP13.07□□□□□ -0.32
RNF41-203ENST00000547967 RUSC1Q9BVN2 902 aa13.07□□□□□ -0.32
RNF41-203ENST00000547967 ABHD10Q9NUJ1 306 aa13.07□□□□□ -0.32
RNF41-203ENST00000547967 RNF181Q9P0P0 153 aa13.07□□□□□ -0.32
RNF41-203ENST00000547967 PCDHA2Q9Y5H9 948 aa13.07□□□□□ -0.32
RNF41-203ENST00000547967 DNM2P50570 870 aa13.06□□□□□ -0.32
RNF41-203ENST00000547967 LRRC63Q05C16 580 aa13.06□□□□□ -0.32
RNF41-203ENST00000547967 PPP2R5CQ13362 524 aa13.06□□□□□ -0.32
RNF41-203ENST00000547967 SYCP1Q15431 976 aa13.06□□□□□ -0.32
RNF41-203ENST00000547967 MIIPQ5JXC2 388 aa13.06□□□□□ -0.32
RNF41-203ENST00000547967 KIF18AQ8NI77 898 aa13.06□□□□□ -0.32
RNF41-203ENST00000547967 SCFD1Q8WVM8 642 aa13.06□□□□□ -0.32
RNF41-203ENST00000547967 TSG101Q99816 390 aa13.06□□□□□ -0.32
RNF41-203ENST00000547967 WRAP73Q9P2S5 460 aaPredicted RBP13.06□□□□□ -0.32
RNF41-203ENST00000547967 PAXBP1Q9Y5B6 917 aa13.06□□□□□ -0.32
RNF41-203ENST00000547967 ZSCAN12O43309 604 aa13.06□□□□□ -0.32
RNF41-203ENST00000547967 TRIM21P19474 475 aaKnown RBP13.06□□□□□ -0.32
RNF41-203ENST00000547967 MRPS9P82933 396 aaKnown RBP13.06□□□□□ -0.32
RNF41-203ENST00000547967 RBM10P98175 930 aaKnown RBP13.06□□□□□ -0.32
RNF41-203ENST00000547967 SFR1Q86XK3 245 aa13.06□□□□□ -0.32
RNF41-203ENST00000547967 BANK1Q8NDB2 785 aa13.06□□□□□ -0.32
RNF41-203ENST00000547967 SETQ01105 290 aaPredicted RBP13.05□□□□□ -0.32
RNF41-203ENST00000547967 PLS1Q14651 629 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 SNRNP48Q6IEG0 339 aaKnown RBP13.05□□□□□ -0.32
RNF41-203ENST00000547967 RNF207Q6ZRF8 634 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 RMDN3Q96TC7 470 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 TEKT3Q9BXF9 490 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 AGPAT5Q9NUQ2 364 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 DNAI1Q9UI46 699 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 SAMM50Q9Y512 469 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 A0A0U1RQJ8 604 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 CCP110O43303 1012 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 SLC26A4O43511 780 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 EYA4O95677 639 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 BAATQ14032 418 aaPredicted RBP13.05□□□□□ -0.32
RNF41-203ENST00000547967 SUPT20HL1Q3ZLR7 823 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 RINT1Q6NUQ1 792 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 LRRC55Q6ZSA7 311 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 TEX2Q8IWB9 1127 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 ATRIPQ8WXE1 791 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 RNF146Q9NTX7 359 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 LUC7L2Q9Y383 392 aaKnown RBP13.05□□□□□ -0.32
RNF41-203ENST00000547967 STK24Q9Y6E0 443 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 PITPNM2Q9BZ72 1349 aa13.05□□□□□ -0.32
RNF41-203ENST00000547967 A0A1W2PQC6 194 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 ADM5C9JUS6 153 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 FKBP3Q00688 224 aaKnown RBP13.04□□□□□ -0.32
RNF41-203ENST00000547967 MTMR1Q13613 665 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 TKFCQ3LXA3 575 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 CCDC155Q8N6L0 562 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 CHP1Q99653 195 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 LXNQ9BS40 222 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 NDST4Q9H3R1 872 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 MRPL44Q9H9J2 332 aaKnown RBP13.04□□□□□ -0.32
RNF41-203ENST00000547967 LZTFL1Q9NQ48 299 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 FRMD3A2A2Y4 597 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 TESPA1A2RU30 521 aaPredicted RBP13.04□□□□□ -0.32
RNF41-203ENST00000547967 PEX10O60683 326 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 TBCAO75347 108 aaKnown RBP13.04□□□□□ -0.32
RNF41-203ENST00000547967 USP2O75604 605 aaPredicted RBP13.04□□□□□ -0.32
RNF41-203ENST00000547967 PRPF6O94906 941 aaKnown RBP13.04□□□□□ -0.32
RNF41-203ENST00000547967 FGFR1OPO95684 399 aaKnown RBP13.04□□□□□ -0.32
RNF41-203ENST00000547967 MYBP10242 640 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 ERVK-24P63145 666 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 TRIM14Q14142 442 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 COG2Q14746 738 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 VWA3BQ502W6 1294 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 FKBP15Q5T1M5 1219 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 KRT26Q7Z3Y9 468 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 NAA15Q9BXJ9 866 aaKnown RBP13.04□□□□□ -0.32
RNF41-203ENST00000547967 TUFT1Q9NNX1 390 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 TMOD4Q9NZQ9 345 aa13.04□□□□□ -0.32
RNF41-203ENST00000547967 RASSF10A6NK89 507 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 ETF1P62495 437 aaKnown RBP13.03□□□□□ -0.32
RNF41-203ENST00000547967 ITGB3BPQ13352 177 aaPredicted RBP13.03□□□□□ -0.32
RNF41-203ENST00000547967 PGM5Q15124 567 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 CCDC40Q4G0X9 1142 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 ZCWPW2Q504Y3 356 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 ARHGEF16Q5VV41 709 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 PCNX4Q63HM2 1172 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 TRIM65Q6PJ69 517 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 GPIHBP1Q8IV16 184 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 SH2D3AQ9BRG2 576 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 SYT17Q9BSW7 474 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 IRX2Q9BZI1 471 aaPredicted RBP13.03□□□□□ -0.32
RNF41-203ENST00000547967 KCTD10Q9H3F6 313 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 FAM207AQ9NSI2 230 aaPredicted RBP13.03□□□□□ -0.32
RNF41-203ENST00000547967 RPTORQ8N122 1335 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 SSC5DA1L4H1 1573 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 C19orf81C9J6K1 198 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 KIF2AO00139 706 aaPredicted RBP13.03□□□□□ -0.32
RNF41-203ENST00000547967 DYNC1I1O14576 645 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 GCNT3O95395 438 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 CCDC175P0C221 793 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 YBX3P16989 372 aaKnown RBP eCLIP13.03□□□□□ -0.323e-8■■■■□ 21.6
RNF41-203ENST00000547967 KCNA1Q09470 495 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 VGLL4Q14135 290 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 TMEM132BQ14DG7 1078 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 MAEAQ7L5Y9 396 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms