RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 MYCLP1P12525 358 aaPredicted RBP3.11□□□□□ -1.91
CPNE8-205ENST00000547417 CPEP16870 476 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 SLC6A11P48066 632 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 EXOSC10Q01780 885 aaKnown RBP3.11□□□□□ -1.91
CPNE8-205ENST00000547417 SCRN1Q12765 414 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 PABPC4Q13310 644 aaKnown RBP eCLIP3.11□□□□□ -1.91
CPNE8-205ENST00000547417 SV2CQ496J9 727 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 CT47A1Q5JQC4 288 aaPredicted RBP3.11□□□□□ -1.91
CPNE8-205ENST00000547417 MROH9Q5TGP6 573 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 PRAMEF18Q5VWM3 479 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 MBLAC2Q68D91 279 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 POMZP3Q6PJE2 187 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 USP51Q70EK9 711 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 MILR1Q7Z6M3 343 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 TEX2Q8IWB9 1127 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 CRACR2BQ8N4Y2 399 aaPredicted RBP3.11□□□□□ -1.91
CPNE8-205ENST00000547417 PRPF38AQ8NAV1 312 aaKnown RBP3.11□□□□□ -1.91
CPNE8-205ENST00000547417 CDC6Q99741 560 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 MRIQ9BWK5 157 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 MRPL4Q9BYD3 311 aaKnown RBP3.11□□□□□ -1.91
CPNE8-205ENST00000547417 NCOA5Q9HCD5 579 aaKnown RBP3.11□□□□□ -1.91
CPNE8-205ENST00000547417 GPRC5CQ9NQ84 441 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 GEMIN8Q9NWZ8 242 aaKnown RBP3.11□□□□□ -1.91
CPNE8-205ENST00000547417 BTG4Q9NY30 223 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 PPP4R1LQ9P1A2 415 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 CHPF2Q9P2E5 772 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 MAGEC2Q9UBF1 373 aaPredicted RBP3.11□□□□□ -1.91
CPNE8-205ENST00000547417 EMC9Q9Y3B6 208 aa3.11□□□□□ -1.91
CPNE8-205ENST00000547417 A0A087X0B3 334 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 NOP56O00567 594 aaKnown RBP3.1□□□□□ -1.91
CPNE8-205ENST00000547417 NPTXRO95502 500 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 ZNF28P17035 718 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 CNGA1P29973 690 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 IL13P35225 146 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 ACVRL1P37023 503 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 STAT5AP42229 794 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 SUMO1P63165 101 aaKnown RBP3.1□□□□□ -1.91
CPNE8-205ENST00000547417 NKX3-2P78367 333 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 ICAM4Q14773 271 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 CDSNQ15517 529 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 INF2Q27J81 1249 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 IQCEQ6IPM2 695 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 CRIP3Q6Q6R5 217 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 THNSL2Q86YJ6 484 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 RIOX2Q8IUF8 465 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 DHX37Q8IY37 1157 aaKnown RBP3.1□□□□□ -1.91
CPNE8-205ENST00000547417 AHI1Q8N157 1196 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 Q8N1X5 172 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 PPM1KQ8N3J5 372 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 ZNF513Q8N8E2 541 aaPredicted RBP3.1□□□□□ -1.91
CPNE8-205ENST00000547417 BVESQ8NE79 360 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 CCDC136Q96JN2 1154 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 CCDC140Q96MF4 163 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 YIPF4Q9BSR8 244 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 AARSD1Q9BTE6 412 aaKnown RBP3.1□□□□□ -1.91
CPNE8-205ENST00000547417 MENTQ9BUN1 341 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 CHMP4AQ9BY43 222 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 KLC2Q9H0B6 622 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 TMEM168Q9H0V1 697 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 L2HGDHQ9H9P8 463 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 ARHGEF4Q9NR80 690 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 LRP2BPQ9P2M1 347 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 APEX2Q9UBZ4 518 aa3.1□□□□□ -1.91
CPNE8-205ENST00000547417 MRPS23Q9Y3D9 190 aaKnown RBP3.1□□□□□ -1.91
CPNE8-205ENST00000547417 ARID4BQ4LE39 1312 aaPredicted RBP3.1□□□□□ -1.91
CPNE8-205ENST00000547417 TRBV23-1A0A0A0MS06 115 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 GPR42O15529 346 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 PDE8AO60658 829 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 EFCAB14O75071 495 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 FZD7O75084 574 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 CYP7B1O75881 506 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 SLPIP03973 132 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 CAPNS1P04632 268 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 POU3F2P20265 443 aaPredicted RBP3.09□□□□□ -1.91
CPNE8-205ENST00000547417 GTF2A2P52657 109 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 PPP2CBP62714 309 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 RPL11P62913 178 aaKnown RBP3.09□□□□□ -1.91
CPNE8-205ENST00000547417 PPP2CAP67775 309 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 ADAM9Q13443 819 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 CR1LQ2VPA4 569 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 TRIM61Q5EBN2 209 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 FAM209AQ5JX71 171 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 ODR4Q5SWX8 454 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 GTF2IRD2BQ6EKJ0 949 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 ARHGEF18Q6ZSZ5 1173 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 CEP68Q76N32 757 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 GTF2IRD2Q86UP8 949 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 CIR1Q86X95 450 aaPredicted RBP3.09□□□□□ -1.91
CPNE8-205ENST00000547417 ZFPM1Q8IX07 1006 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 DNERQ8NFT8 737 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 NPLOC4Q8TAT6 608 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 JDP2Q8WYK2 163 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 TRMT2BQ96GJ1 504 aaKnown RBP3.09□□□□□ -1.91
CPNE8-205ENST00000547417 YTHDC1Q96MU7 727 aaKnown RBP3.09□□□□□ -1.91
CPNE8-205ENST00000547417 CLIC6Q96NY7 704 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 IER2Q9BTL4 223 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 VPS11Q9H270 941 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 DEF6Q9H4E7 631 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 CD248Q9HCU0 757 aa3.09□□□□□ -1.91
CPNE8-205ENST00000547417 JADE2Q9NQC1 790 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms