RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 SETD4Q9NVD3 440 aa10.78□□□□□ -0.68
SSH1-205ENST00000546812 MRPL11Q9Y3B7 192 aaKnown RBP10.78□□□□□ -0.68
SSH1-205ENST00000546812 PDGFBP01127 241 aaPredicted RBP10.77□□□□□ -0.69
SSH1-205ENST00000546812 CHRNA1P02708 482 aa10.77□□□□□ -0.69
SSH1-205ENST00000546812 LGALS2P05162 132 aa10.77□□□□□ -0.69
SSH1-205ENST00000546812 UBA1P22314 1058 aaKnown RBP10.77□□□□□ -0.69
SSH1-205ENST00000546812 HDAC1Q13547 482 aaPredicted RBP10.77□□□□□ -0.69
SSH1-205ENST00000546812 VPS53Q5VIR6 699 aa10.77□□□□□ -0.69
SSH1-205ENST00000546812 RBM23Q86U06 439 aaKnown RBP10.77□□□□□ -0.69
SSH1-205ENST00000546812 VSIG10LQ86VR7 867 aa10.77□□□□□ -0.69
SSH1-205ENST00000546812 KLHL23Q8NBE8 558 aa10.77□□□□□ -0.69
SSH1-205ENST00000546812 PDCD2LQ9BRP1 358 aa10.77□□□□□ -0.69
SSH1-205ENST00000546812 USP26Q9BXU7 913 aa10.77□□□□□ -0.69
SSH1-205ENST00000546812 MRPL42Q9Y6G3 142 aaKnown RBP10.77□□□□□ -0.69
SSH1-205ENST00000546812 CFBP00751 764 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 GHRP10912 638 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 MYCLP12524 364 aaPredicted RBP10.76□□□□□ -0.69
SSH1-205ENST00000546812 HSD17B4P51659 736 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 ADAM17P78536 824 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 GHRHRQ02643 423 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 QRICH1Q2TAL8 776 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 STOX1Q6ZVD7 989 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 CMTR2Q8IYT2 770 aaKnown RBP10.76□□□□□ -0.69
SSH1-205ENST00000546812 ADGRF4Q8IZF3 695 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 ATP8B4Q8TF62 1192 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 POF1BQ8WVV4 589 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 NKD2Q969F2 451 aaPredicted RBP10.76□□□□□ -0.69
SSH1-205ENST00000546812 DCTPP1Q9H773 170 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 TLE6Q9H808 572 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 TTC41PQ6P2S7 1318 aa10.76□□□□□ -0.69
SSH1-205ENST00000546812 EPG5Q9HCE0 2579 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 ZNF292O60281 2723 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 KMT2EQ8IZD2 1858 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 NOP56O00567 594 aaKnown RBP10.75□□□□□ -0.69
SSH1-205ENST00000546812 IGHDP01880 384 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 FGAP02671 866 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 ARHGAP4P98171 946 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 LPIN1Q14693 890 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 FRMD5Q7Z6J6 570 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 ZBTB33Q86T24 672 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 DGKHQ86XP1 1220 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 ADSSL1Q8N142 457 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 CRIPAKQ8N1N5 446 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 TMEM105Q8N8V8 129 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 PI4K2BQ8TCG2 481 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 GPKOWQ92917 476 aaPredicted RBP eCLIP10.75□□□□□ -0.69
SSH1-205ENST00000546812 RWDD1Q9H446 243 aaPredicted RBP10.75□□□□□ -0.69
SSH1-205ENST00000546812 BCAS3Q9H6U6 928 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 MAP3K20Q9NYL2 800 aaKnown RBP10.75□□□□□ -0.69
SSH1-205ENST00000546812 PCDHGC5Q9Y5F6 944 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 DMXL1Q9Y485 3027 aa10.75□□□□□ -0.69
SSH1-205ENST00000546812 EP300Q09472 2414 aaPredicted RBP10.75□□□□□ -0.69
SSH1-205ENST00000546812 RALGAPA2Q2PPJ7 1873 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 CACNA1BQ00975 2339 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 FSD2A1L4K1 749 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 OPLAHO14841 1288 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 PER2O15055 1255 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 PCP11498 1178 aaKnown RBP10.74□□□□□ -0.69
SSH1-205ENST00000546812 RBM10P98175 930 aaKnown RBP10.74□□□□□ -0.69
SSH1-205ENST00000546812 MGAT3Q09327 533 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 PGM5Q15124 567 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 MCTP2Q6DN12 878 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 TAF2Q6P1X5 1199 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 UBALD2Q8IYN6 164 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 KREMEN2Q8NCW0 462 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 VN1R2Q8NFZ6 395 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 IL31RAQ8NI17 732 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 MICAL1Q8TDZ2 1067 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 LMBR1Q8WVP7 490 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 NEK1Q96PY6 1258 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 CDCA3Q99618 268 aaPredicted RBP10.74□□□□□ -0.69
SSH1-205ENST00000546812 S1PR5Q9H228 398 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 JMJD4Q9H9V9 463 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 CCDC171Q6TFL3 1326 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 NRCAMQ92823 1304 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 NCOR2Q9Y618 2525 aa10.74□□□□□ -0.69
SSH1-205ENST00000546812 PLXNA3P51805 1871 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 DUSP6Q16828 381 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 ASPRV1Q53RT3 343 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 FBXO47Q5MNV8 452 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 METTL7BQ6UX53 244 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 TMEM184AQ6ZMB5 413 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 RUFY4Q6ZNE9 571 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 MFSD6Q6ZSS7 791 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 TSHZ1Q6ZSZ6 1077 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 RSPH3Q86UC2 560 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 RTN4RL1Q86UN2 441 aaPredicted RBP10.73□□□□□ -0.69
SSH1-205ENST00000546812 NPAS4Q8IUM7 802 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 SAMD3Q8N6K7 520 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 PNMA1Q8ND90 353 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 GPR20Q99678 358 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 AMNQ9BXJ7 453 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 VAT1LQ9HCJ6 419 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 ZNF215Q9UL58 517 aaPredicted RBP10.73□□□□□ -0.69
SSH1-205ENST00000546812 DNAH14Q0VDD8 3507 aa10.73□□□□□ -0.69
SSH1-205ENST00000546812 NLRC5Q86WI3 1866 aa10.72□□□□□ -0.69
SSH1-205ENST00000546812 DHX16O60231 1041 aaKnown RBP10.72□□□□□ -0.69
SSH1-205ENST00000546812 PPFIA3O75145 1194 aa10.72□□□□□ -0.69
SSH1-205ENST00000546812 STAG3L1P0CL83 205 aa10.72□□□□□ -0.69
SSH1-205ENST00000546812 CCND2P30279 289 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms