RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ARHGEF16Q5VV41 709 aa13.3□□□□□ -0.28
CCDC38-202ENST00000546386 MAP1SQ66K74 1059 aaPredicted RBP13.3□□□□□ -0.28
CCDC38-202ENST00000546386 PPFIBP1Q86W92 1011 aa13.3□□□□□ -0.28
CCDC38-202ENST00000546386 PPP1R13BQ96KQ4 1090 aa13.3□□□□□ -0.28
CCDC38-202ENST00000546386 SPTLC3Q9NUV7 552 aa13.3□□□□□ -0.28
CCDC38-202ENST00000546386 CYP3A7-CYP3A51PA0A087WV96 503 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 FOSP01100 380 aaPredicted RBP13.29□□□□□ -0.28
CCDC38-202ENST00000546386 TPM3P06753 285 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 CYP3A7P24462 503 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 SLC12A3P55017 1021 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 DCAF15Q66K64 600 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 PLA2G4FQ68DD2 849 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 UNC13DQ70J99 1090 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 FAM160B2Q86V87 743 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 SLFN12Q8IYM2 578 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 ELMO3Q96BJ8 720 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 NOC4LQ9BVI4 516 aaKnown RBP13.29□□□□□ -0.28
CCDC38-202ENST00000546386 GPRC5CQ9NQ84 441 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 SSC5DA1L4H1 1573 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 FANCGO15287 622 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 NPEPPSP55786 919 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 GSDMDP57764 484 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 MTMR1Q13613 665 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 UGCGQ16739 394 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 Q4G0T1 1027 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 FILIP1LQ4L180 1135 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 FAM26FQ5R3K3 315 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 CNNM4Q6P4Q7 775 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 TMEM139Q8IV31 216 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 ACRBPQ8NEB7 543 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 LXNQ9BS40 222 aa13.29□□□□□ -0.28
CCDC38-202ENST00000546386 MAGEC2Q9UBF1 373 aaPredicted RBP13.29□□□□□ -0.28
CCDC38-202ENST00000546386 MORC2Q9Y6X9 1032 aaPredicted RBP13.29□□□□□ -0.28
CCDC38-202ENST00000546386 TTC26A0AVF1 554 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 ZBED4O75132 1171 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 PSMD10O75832 226 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 TBC1D8BQ0IIM8 1120 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 GIT2Q14161 759 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 KCNB1Q14721 858 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 SYCP1Q15431 976 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 PTPN14Q15678 1187 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 RAD9BQ6WBX8 426 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 DNAAF5Q86Y56 855 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 LRRN4CLQ8ND94 238 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 SCFD1Q8WVM8 642 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 PYM1Q9BRP8 204 aaKnown RBP13.28□□□□□ -0.28
CCDC38-202ENST00000546386 MRPL44Q9H9J2 332 aaKnown RBP13.28□□□□□ -0.28
CCDC38-202ENST00000546386 TRIM10Q9UDY6 481 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 RABGAP1Q9Y3P9 1069 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 PIK3CDO00329 1044 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 GCNT3O95395 438 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 PGK2P07205 417 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 CCNE1P24864 410 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 RPA1P27694 616 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 ARID5AQ03989 594 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 FAM84AQ96KN4 292 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 KIFC3Q9BVG8 833 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 STK17AQ9UEE5 414 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 SNCAIPQ9Y6H5 919 aa13.28□□□□□ -0.28
CCDC38-202ENST00000546386 AKR1B15C9JRZ8 316 aaPredicted RBP13.27□□□□□ -0.28
CCDC38-202ENST00000546386 KRT9P35527 623 aa13.27□□□□□ -0.28
CCDC38-202ENST00000546386 TBX2Q13207 712 aaPredicted RBP13.27□□□□□ -0.28
CCDC38-202ENST00000546386 TKFCQ3LXA3 575 aa13.27□□□□□ -0.28
CCDC38-202ENST00000546386 TMEM63BQ5T3F8 832 aa13.27□□□□□ -0.28
CCDC38-202ENST00000546386 APOBEC3FQ8IUX4 373 aaKnown RBP13.27□□□□□ -0.28
CCDC38-202ENST00000546386 MYCT1Q8N699 235 aa13.27□□□□□ -0.28
CCDC38-202ENST00000546386 CCDC47Q96A33 483 aaKnown RBP13.27□□□□□ -0.28
CCDC38-202ENST00000546386 IMPACTQ9P2X3 320 aa13.27□□□□□ -0.28
CCDC38-202ENST00000546386 PLEKP08567 350 aaPredicted RBP13.27□□□□□ -0.29
CCDC38-202ENST00000546386 TRIM21P19474 475 aaKnown RBP13.27□□□□□ -0.29
CCDC38-202ENST00000546386 CASP4P49662 377 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 MMP14P50281 582 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 PGM5Q15124 567 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 MYOCDQ8IZQ8 938 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCDC38-202ENST00000546386 LPAR1Q92633 364 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 MXRA8Q9BRK3 442 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 TMOD4Q9NZQ9 345 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 DNAI1Q9UI46 699 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 ZNF214Q9UL59 606 aaPredicted RBP13.27□□□□□ -0.29
CCDC38-202ENST00000546386 LTBP3Q9NS15 1303 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 HAUS3Q68CZ6 603 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 RINT1Q6NUQ1 792 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 SEPT14Q6ZU15 432 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 NCAPG2Q86XI2 1143 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 CCDC150Q8NCX0 1101 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 HSD17B14Q9BPX1 270 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 NT5C3AQ9H0P0 336 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 GLT8D2Q9H1C3 349 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 NLRC4Q9NPP4 1024 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 AFG3L2Q9Y4W6 797 aa13.27□□□□□ -0.29
CCDC38-202ENST00000546386 RASSF10A6NK89 507 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 SPDYE16A6NNV3 312 aaPredicted RBP13.26□□□□□ -0.29
CCDC38-202ENST00000546386 USO1O60763 962 aaKnown RBP13.26□□□□□ -0.29
CCDC38-202ENST00000546386 CYP2C8P10632 490 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 HOXD13P35453 343 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 ERVK-24P63145 666 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 MB21D1Q8N884 522 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 ZSWIM2Q8NEG5 633 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 PPP1R13LQ8WUF5 828 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms