RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 HSPA1AP0DMV8 641 aaKnown RBP7.34□□□□□ -1.23
PRKDC-211ENST00000546304 HSPA1BP0DMV9 641 aaKnown RBP7.34□□□□□ -1.23
PRKDC-211ENST00000546304 SLC16A2P36021 539 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 EVCP57679 992 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 SFSWAPQ12872 951 aaKnown RBP7.34□□□□□ -1.23
PRKDC-211ENST00000546304 COG2Q14746 738 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 TTBK2Q6IQ55 1244 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 BTNL9Q6UXG8 535 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 TMTC3Q6ZXV5 915 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 BTLAQ7Z6A9 289 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 FCHSD1Q86WN1 690 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 ANKRD13CQ8N6S4 541 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 PRPF38AQ8NAV1 312 aaKnown RBP7.34□□□□□ -1.23
PRKDC-211ENST00000546304 REPS2Q8NFH8 660 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 CHURC1Q8WUH1 139 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 PBXIP1Q96AQ6 731 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 CEP63Q96MT8 703 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 P2RX7Q99572 595 aaKnown RBP7.34□□□□□ -1.23
PRKDC-211ENST00000546304 SPZ1Q9BXG8 430 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 ALDH8A1Q9H2A2 487 aaPredicted RBP7.34□□□□□ -1.23
PRKDC-211ENST00000546304 CPVLQ9H3G5 476 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 R3HDMLQ9H3Y0 253 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 SLC38A10Q9HBR0 1119 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 BRD7Q9NPI1 651 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 RBM28Q9NW13 759 aaKnown RBP7.34□□□□□ -1.23
PRKDC-211ENST00000546304 CPA4Q9UI42 421 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 LRRC37A2A6NM11 1700 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 ZNFX1Q9P2E3 1918 aaKnown RBP7.34□□□□□ -1.23
PRKDC-211ENST00000546304 MCM3APO60318 1980 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 CCDC196A0A1B0GTZ2 297 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 KLRF2D3W0D1 207 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 PEX10O60683 326 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 CNMDO75829 334 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 LARGE1O95461 756 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 TBC1D8O95759 1140 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 HOXB4P17483 251 aaPredicted RBP7.33□□□□□ -1.24
PRKDC-211ENST00000546304 PDIA3P30101 505 aaKnown RBP7.33□□□□□ -1.24
PRKDC-211ENST00000546304 GNAQP50148 359 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 ERVK-24P63145 666 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 CDC37Q16543 378 aaPredicted RBP7.33□□□□□ -1.24
PRKDC-211ENST00000546304 SLC35G1Q2M3R5 365 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 NOM1Q5C9Z4 860 aaKnown RBP7.33□□□□□ -1.24
PRKDC-211ENST00000546304 C17orf99Q6UX52 265 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 FANCBQ8NB91 859 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 BTBD6Q96KE9 485 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 MDFIQ99750 246 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 LZTS2Q9BRK4 669 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 TEX13BQ9BXU2 312 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 UBA5Q9GZZ9 404 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 SPATC1LQ9H0A9 340 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 RANBP17Q9H2T7 1088 aaKnown RBP7.33□□□□□ -1.24
PRKDC-211ENST00000546304 NCOA5Q9HCD5 579 aaKnown RBP7.33□□□□□ -1.24
PRKDC-211ENST00000546304 TXNRD2Q9NNW7 524 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 HOXC10Q9NYD6 342 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 BTBD7Q9P203 1132 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 MORF4L1Q9UBU8 362 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 ZNF214Q9UL59 606 aaPredicted RBP7.33□□□□□ -1.24
PRKDC-211ENST00000546304 TPCN1Q9ULQ1 816 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 ADAMTS5Q9UNA0 930 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 RABGAP1Q9Y3P9 1069 aa7.33□□□□□ -1.24
PRKDC-211ENST00000546304 CTDP1Q9Y5B0 961 aaPredicted RBP7.33□□□□□ -1.24
PRKDC-211ENST00000546304 ZNF536O15090 1300 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 TGFBR3LH3BV60 316 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 ATP2A1O14983 1001 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 FOXN1O15353 648 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 CYTH3O43739 400 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 ZBED4O75132 1171 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 SIN3BO75182 1162 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 ICAM1P05362 532 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 HSPA8P11142 646 aaKnown RBP7.32□□□□□ -1.24
PRKDC-211ENST00000546304 TAL1P17542 331 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-211ENST00000546304 CDC27P30260 824 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 OAZ1P54368 228 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 PCBP4P57723 403 aaKnown RBP7.32□□□□□ -1.24
PRKDC-211ENST00000546304 SNAP25P60880 206 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 SNRPNP63162 240 aaKnown RBP7.32□□□□□ -1.24
PRKDC-211ENST00000546304 CCNA1P78396 465 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 SPEM2Q0P670 501 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 SCRN1Q12765 414 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 STK3Q13188 491 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 PLS1Q14651 629 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 TMEM132BQ14DG7 1078 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 PPP2R5BQ15173 497 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 QRICH1Q2TAL8 776 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 SNRNP48Q6IEG0 339 aaKnown RBP7.32□□□□□ -1.24
PRKDC-211ENST00000546304 CCDC174Q6PII3 467 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 NBPF11Q86T75 865 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 HOMER1Q86YM7 354 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 ADGRF4Q8IZF3 695 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 SRBD1Q8N5C6 995 aaKnown RBP7.32□□□□□ -1.24
PRKDC-211ENST00000546304 GPRC5AQ8NFJ5 357 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 STK32AQ8WU08 396 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 GTF3C6Q969F1 213 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 ZNF274Q96GC6 653 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-211ENST00000546304 MYO19Q96H55 970 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 SLKQ9H2G2 1235 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-211ENST00000546304 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.32□□□□□ -1.24
PRKDC-211ENST00000546304 RBPJLQ9UBG7 517 aa7.32□□□□□ -1.24
PRKDC-211ENST00000546304 SEC63Q9UGP8 760 aaKnown RBP7.32□□□□□ -1.24
PRKDC-211ENST00000546304 DMGDHQ9UI17 866 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms