RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 FAM133AQ8N9E0 248 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 USP6P35125 1406 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 LRRD1A4D1F6 860 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 ERVV-1B6SEH8 477 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 SH2B2O14492 632 aaPredicted RBP12.63□□□□□ -0.39
CIT-217ENST00000545913 CYP21A2P08686 494 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 MX2P20592 715 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 ARMCX2Q7L311 632 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 RYBPQ8N488 228 aaPredicted RBP12.63□□□□□ -0.39
CIT-217ENST00000545913 GNGT2O14610 69 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 PLCG1P19174 1290 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 PPARGP37231 505 aaPredicted RBP12.63□□□□□ -0.39
CIT-217ENST00000545913 CCT5P48643 541 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 RNF168Q8IYW5 571 aaPredicted RBP12.63□□□□□ -0.39
CIT-217ENST00000545913 NFKBIAP25963 317 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 ESRRGP62508 458 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 KIAA1841Q6NSI8 718 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 UHMK1Q8TAS1 419 aaKnown RBP12.63□□□□□ -0.39
CIT-217ENST00000545913 SH3GLB2Q9NR46 395 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 LRFN2Q9ULH4 789 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 CCDC151A5D8V7 595 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 IPO5O00410 1097 aaKnown RBP12.63□□□□□ -0.39
CIT-217ENST00000545913 IFNAR2P48551 515 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 MXI1P50539 228 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 MID2Q9UJV3 735 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 PNMA6FA0A0J9YX94 578 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 CIITAP33076 1130 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 LIG3P49916 1009 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 PRPF3O43395 683 aaKnown RBP12.62□□□□□ -0.39
CIT-217ENST00000545913 PMLP29590 882 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 TMED2Q15363 201 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 SLFN12LQ6IEE8 588 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 ZNF589Q86UQ0 364 aaPredicted RBP12.62□□□□□ -0.39
CIT-217ENST00000545913 ANKRD13CQ8N6S4 541 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 SLC8A2Q9UPR5 921 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 EXOC1LA0A1B0GW35 172 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 GFPT2O94808 682 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 IFNAR1P17181 557 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 PLTPP55058 493 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 BASP1P80723 227 aaKnown RBP12.62□□□□□ -0.39
CIT-217ENST00000545913 ZBED6P86452 979 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 SNX1Q13596 522 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
CIT-217ENST00000545913 DEPDC1BQ8WUY9 529 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 NRBF2Q96F24 287 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 GOLGA4Q13439 2230 aaKnown RBP12.62□□□□□ -0.39
CIT-217ENST00000545913 PCGF5Q86SE9 256 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 RPF1Q9H9Y2 349 aaKnown RBP12.62□□□□□ -0.39
CIT-217ENST00000545913 CTNND1O60716 968 aaKnown RBP12.62□□□□□ -0.39
CIT-217ENST00000545913 PLA2G4BP0C869 781 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 DDIT3P35638 169 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 CYP4F22Q6NT55 531 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 RNF139Q8WU17 664 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 CHMP6Q96FZ7 201 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 MAGI2Q86UL8 1455 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 ANXA13P27216 316 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 TMED8Q6PL24 325 aaPredicted RBP12.62□□□□□ -0.39
CIT-217ENST00000545913 SIX6OS1Q8N1H7 587 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 TAB3Q8N5C8 712 aaPredicted RBP12.62□□□□□ -0.39
CIT-217ENST00000545913 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.62□□□□□ -0.39
CIT-217ENST00000545913 RASGRP4Q8TDF6 673 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 NUDCD1Q96RS6 583 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 LCMT1Q9UIC8 334 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 LIFRP42702 1097 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 FAM196AQ6ZSG2 479 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 FAM160B2Q86V87 743 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 LINC00301Q8NCQ3 95 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 DHX38Q92620 1227 aaKnown RBP12.62□□□□□ -0.39
CIT-217ENST00000545913 SERPINI1Q99574 410 aa12.62□□□□□ -0.39
CIT-217ENST00000545913 MRPL46Q9H2W6 279 aaKnown RBP12.62□□□□□ -0.39
CIT-217ENST00000545913 TRPC5Q9UL62 973 aaPredicted RBP12.62□□□□□ -0.39
CIT-217ENST00000545913 CLIC2O15247 247 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 TJP3O95049 919 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 PAMP19021 973 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 GCNAQ96QF7 691 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 CXCR5P32302 372 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 EP400NLQ6ZTU2 488 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 PRPF38AQ8NAV1 312 aaKnown RBP12.61□□□□□ -0.39
CIT-217ENST00000545913 GIMAP8Q8ND71 665 aaPredicted RBP12.61□□□□□ -0.39
CIT-217ENST00000545913 PNMA3Q9UL41 463 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 CLRN2A0PK11 232 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 WDR64B1ANS9 1081 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 GOLGA8SH3BPF8 625 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 NVLO15381 856 aaKnown RBP12.61□□□□□ -0.39
CIT-217ENST00000545913 ART3Q13508 389 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 TRIM4Q9C037 500 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 SYNGAP1Q96PV0 1343 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 ARHGAP31Q2M1Z3 1444 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 C2orf54Q08AI8 447 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 RASIP1Q5U651 963 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 ATG16L1Q676U5 607 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 TTC19Q6DKK2 380 aaPredicted RBP12.61□□□□□ -0.39
CIT-217ENST00000545913 PDXDC2PQ6P474 469 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 NLRP10Q86W26 655 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 EMILIN3Q9NT22 766 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 PCDHA13Q9Y5I0 950 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 NDUFA10O95299 355 aa12.61□□□□□ -0.39
CIT-217ENST00000545913 KIF23Q02241 960 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms