RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 CYP4F8P98187 520 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 DSG1Q02413 1049 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 CWF19L1Q69YN2 538 aaKnown RBP5.48□□□□□ -1.53
SNHG1-222ENST00000545308 RSPO2Q6UXX9 243 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-222ENST00000545308 KIF18BQ86Y91 864 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 IFNL3Q8IZI9 196 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 CNTD1Q8N815 330 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 IGSF22Q8N9C0 903 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 OR2W6PQ8NHA6 318 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 PWWP2AQ96N64 755 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 ZFYVE21Q9BQ24 234 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 POLR3GLQ9BT43 218 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.48□□□□□ -1.53
SNHG1-222ENST00000545308 TNFRSF12AQ9NP84 129 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 LUC7LQ9NQ29 371 aaKnown RBP5.48□□□□□ -1.53
SNHG1-222ENST00000545308 GPR27Q9NS67 375 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 CLEC1BQ9P126 229 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 COQ6Q9Y2Z9 468 aa5.48□□□□□ -1.53
SNHG1-222ENST00000545308 ARID4BQ4LE39 1312 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-222ENST00000545308 NUDT19A8MXV4 375 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 TRAF5O00463 557 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 GABRDO14764 452 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 AKAP10O43572 662 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 ZEB2O60315 1214 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 SCGB1D2O95969 90 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 F2P00734 622 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 CELA3BP08861 270 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 VAV1P15498 845 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 LTBRP36941 435 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 ADCYAP1R1P41586 468 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 SCNN1BP51168 640 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 KRTAP10-2P60368 255 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 PPP2R5AQ15172 486 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 RTP2Q5QGT7 225 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 ERICH6BQ5W0A0 696 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 RCSD1Q6JBY9 416 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 LBX2Q6XYB7 198 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 PRRT2Q7Z6L0 340 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-222ENST00000545308 DDX53Q86TM3 631 aaKnown RBP5.47□□□□□ -1.53
SNHG1-222ENST00000545308 WDR75Q8IWA0 830 aaKnown RBP5.47□□□□□ -1.53
SNHG1-222ENST00000545308 ZDHHC14Q8IZN3 488 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 LINC01356Q8N9X3 169 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 SYT8Q8NBV8 401 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 NUP43Q8NFH3 380 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 PCDH19Q8TAB3 1148 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.47□□□□□ -1.53
SNHG1-222ENST00000545308 YIPF4Q9BSR8 244 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 CDADC1Q9BWV3 514 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 PUS7LQ9H0K6 701 aaKnown RBP5.47□□□□□ -1.53
SNHG1-222ENST00000545308 TRHDEQ9UKU6 1024 aa5.47□□□□□ -1.53
SNHG1-222ENST00000545308 SMARCA4P51532 1647 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 PRC1O43663 620 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 BUB1BO60566 1050 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-222ENST00000545308 SRGAP2CP0DJJ0 459 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 NAT1P18440 290 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 SEPHS1P49903 392 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 E4F1Q66K89 784 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-222ENST00000545308 MBLAC2Q68D91 279 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 RPTNQ6XPR3 784 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 ZC3H7AQ8IWR0 971 aaKnown RBP5.46□□□□□ -1.54
SNHG1-222ENST00000545308 CCDC146Q8IYE0 955 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 TP53I13Q8NBR0 393 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-222ENST00000545308 RCBTB1Q8NDN9 531 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 SMC1BQ8NDV3 1235 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 TMEM52Q8NDY8 209 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 TEPSINQ96N21 525 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 RTFDC1Q9BY42 306 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-222ENST00000545308 AP5S1Q9NUS5 200 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 GEMIN8Q9NWZ8 242 aaKnown RBP5.46□□□□□ -1.54
SNHG1-222ENST00000545308 APOBEC2Q9Y235 224 aaKnown RBP5.46□□□□□ -1.54
SNHG1-222ENST00000545308 TNKSO95271 1327 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 IRS2Q9Y4H2 1338 aa5.46□□□□□ -1.54
SNHG1-222ENST00000545308 MRC2Q9UBG0 1479 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 ZC3H12DA2A288 527 aaKnown RBP5.45□□□□□ -1.54
SNHG1-222ENST00000545308 PRKD3O94806 890 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 FKBP9O95302 570 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 GSTM1P09488 218 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 PYGMP11217 842 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 NOP2P46087 812 aaKnown RBP5.45□□□□□ -1.54
SNHG1-222ENST00000545308 MECP2P51608 486 aaKnown RBP5.45□□□□□ -1.54
SNHG1-222ENST00000545308 NCKAP1LP55160 1127 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 CAP1Q01518 475 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 INF2Q27J81 1249 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 SYDE2Q5VT97 1194 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 FKBP9P1Q75LS8 142 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 DIO2Q92813 273 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 HOOK2Q96ED9 719 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 GPR101Q96P66 508 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-222ENST00000545308 JMJD8Q96S16 334 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 CELF4Q9BZC1 486 aaKnown RBP5.45□□□□□ -1.54
SNHG1-222ENST00000545308 ZIM2Q9NZV7 527 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 IMPACTQ9P2X3 320 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 PPARGC1AQ9UBK2 798 aaKnown RBP5.45□□□□□ -1.54
SNHG1-222ENST00000545308 B4GALT6Q9UBX8 382 aa5.45□□□□□ -1.54
SNHG1-222ENST00000545308 ATP2A2P16615 1042 aaKnown RBP5.44□□□□□ -1.54
SNHG1-222ENST00000545308 IGFBP6P24592 240 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-222ENST00000545308 MAPKAPK2P49137 400 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 IL2P60568 153 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 PAK1Q13153 545 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 KCNAB2Q13303 367 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms