RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ARL6IP4Q66PJ3 421 aaKnown RBP13.89□□□□□ -0.19
CHD4-211ENST00000544484 RABGGTAQ92696 567 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 AFF2P51816 1311 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 TRIM49BA6NDI0 452 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 NBPF26B4DH59 902 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 USP17L10C9JJH3 530 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 TCP11X2Q5H9J9 407 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 NBPF10Q6P3W6 841 aaKnown RBP13.89□□□□□ -0.19
CHD4-211ENST00000544484 NBPF15Q8N660 670 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 THAP9Q9H5L6 903 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 TMEM260Q9NX78 707 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 KLHL14Q9P2G3 628 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 TET3O43151 1660 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 GBP1P32455 592 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 CYP4F22Q6NT55 531 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 SNX25Q9H3E2 840 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 DAAM1Q9Y4D1 1078 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 CHD1O14646 1710 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 XPOTO43592 962 aaKnown RBP13.89□□□□□ -0.19
CHD4-211ENST00000544484 SGO2Q562F6 1265 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 RESP18Q5W5W9 173 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 ARHGAP24Q8N264 748 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 PPP4R1Q8TF05 950 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 RAVER2Q9HCJ3 691 aaKnown RBP13.89□□□□□ -0.19
CHD4-211ENST00000544484 ADAMTS1Q9UHI8 967 aa13.89□□□□□ -0.19
CHD4-211ENST00000544484 ECE2O60344 883 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 NDUFA10O95299 355 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 CCNYQ8ND76 341 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 TACO1Q9BSH4 297 aaKnown RBP13.88□□□□□ -0.19
CHD4-211ENST00000544484 ZBTB5O15062 677 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 PFKFB3Q16875 520 aaPredicted RBP13.88□□□□□ -0.19
CHD4-211ENST00000544484 LY9Q9HBG7 655 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 ATP8A1Q9Y2Q0 1164 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 CLTCL1P53675 1640 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 PTPREP23469 700 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 RPUSD2Q8IZ73 545 aaKnown RBP13.88□□□□□ -0.19
CHD4-211ENST00000544484 DCLK2Q8N568 766 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 CALN1Q9BXU9 219 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 K7ERI5 159 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 IREB2P48200 963 aaKnown RBP13.88□□□□□ -0.19
CHD4-211ENST00000544484 ARPP19P56211 112 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 ISCA1Q9BUE6 129 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 FAM49AQ9H0Q0 323 aaPredicted RBP13.88□□□□□ -0.19
CHD4-211ENST00000544484 PSMD2Q13200 908 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 TRIP13Q15645 432 aaPredicted RBP13.88□□□□□ -0.19
CHD4-211ENST00000544484 BANK1Q8NDB2 785 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 SMYD2Q9NRG4 433 aa13.88□□□□□ -0.19
CHD4-211ENST00000544484 RFX1P22670 979 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 KIF11P52732 1056 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 MB21D2Q8IYB1 491 aaPredicted RBP13.87□□□□□ -0.19
CHD4-211ENST00000544484 ADCY10Q96PN6 1610 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 ARHGAP42A6NI28 874 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 ZBTB7AO95365 584 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 MRPS25P82663 173 aaKnown RBP13.87□□□□□ -0.19
CHD4-211ENST00000544484 DNAJC24Q6P3W2 148 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 RSPH3Q86UC2 560 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 GOLPH3LQ9H4A5 285 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 EFCC1Q9HA90 598 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 PIM2Q9P1W9 311 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 RPAP1Q9BWH6 1393 aaPredicted RBP13.87□□□□□ -0.19
CHD4-211ENST00000544484 E9PMD0 336 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 KRT1P04264 644 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 FOXO4P98177 505 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 SLC10A4Q96EP9 437 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 PCDHA13Q9Y5I0 950 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 ZHX2Q9Y6X8 837 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 PGRMC1O00264 195 aaKnown RBP13.87□□□□□ -0.19
CHD4-211ENST00000544484 RNASELQ05823 741 aaKnown RBP13.87□□□□□ -0.19
CHD4-211ENST00000544484 OR6B2Q6IFH4 312 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 THNSL1Q8IYQ7 743 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 UBE2Q2Q8WVN8 375 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 GSG1L2A8MUP6 293 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 GSTA1P08263 222 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 GSTA2P09210 222 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 MB21D1Q8N884 522 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 RMDN3Q96TC7 470 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 VCX3BQ9H321 246 aa13.87□□□□□ -0.19
CHD4-211ENST00000544484 ZNF394Q53GI3 561 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 MSTO1Q9BUK6 570 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 SLC38A10Q9HBR0 1119 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 CDHR2Q9BYE9 1310 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 SERPING1P05155 500 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 GPSM2P81274 684 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 PDE1BQ01064 536 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 BBOF1Q8ND07 529 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 SH3GLB2Q9NR46 395 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 CAPN7Q9Y6W3 813 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 UTYO14607 1347 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 SLC7A5Q01650 507 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 LRRC63Q05C16 580 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 WRNIP1Q96S55 665 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 AP1M1Q9BXS5 423 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 CCDC68Q9H2F9 335 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 ACTN1P12814 892 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 MTMR1Q13613 665 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 CCDC170Q8IYT3 715 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 PP2D1A8MPX8 630 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 SLC4A1P02730 911 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 INHBAP08476 426 aa13.86□□□□□ -0.19
CHD4-211ENST00000544484 LMNTD2Q8IXW0 634 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms