RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.16□□□□□ -1.74
BRCA2-206ENST00000544455 ESYT2A0FGR8 921 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 ESYT3A0FGR9 886 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 SPDYE2BA6NHP3 402 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 PLSCR1O15162 318 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 AKR1B10O60218 316 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 SPDYE6P0CI01 402 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 STAT2P52630 851 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 PPP4R3AQ6IN85 833 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 SECISBP2LQ93073 1101 aaKnown RBP4.16□□□□□ -1.74
BRCA2-206ENST00000544455 ZKSCAN4Q969J2 545 aaPredicted RBP4.16□□□□□ -1.74
BRCA2-206ENST00000544455 LENG9Q96B70 501 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 UNC45AQ9H3U1 944 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 ZNHIT6Q9NWK9 470 aaKnown RBP4.16□□□□□ -1.74
BRCA2-206ENST00000544455 SIK3Q9Y2K2 1263 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 CNTNAP1P78357 1384 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 LRRIQ3A6PVS8 624 aaPredicted RBP4.16□□□□□ -1.74
BRCA2-206ENST00000544455 CALCAP01258 141 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 LONRF2Q1L5Z9 754 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 GPR161Q8N6U8 529 aaKnown RBP4.16□□□□□ -1.74
BRCA2-206ENST00000544455 CCDC17Q96LX7 622 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 ALAS1P13196 640 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 CYP2J2P51589 502 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 SPIRE1Q08AE8 756 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 MUM1L1Q5H9M0 696 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 HAUS4Q9H6D7 363 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 ECM29Q5VYK3 1845 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 A0A1W2PQC6 194 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 OGFOD1Q8N543 542 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 RAB34Q9BZG1 259 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 ARGLU1Q9NWB6 273 aaPredicted RBP4.16□□□□□ -1.74
BRCA2-206ENST00000544455 RABGAP1Q9Y3P9 1069 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 PVALEFA0A1B0GWK0 134 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 NOL4O94818 638 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 MYCLP12524 364 aaPredicted RBP4.16□□□□□ -1.74
BRCA2-206ENST00000544455 ZBED6P86452 979 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 BMS1Q14692 1282 aaKnown RBP4.16□□□□□ -1.74
BRCA2-206ENST00000544455 ZCWPW2Q504Y3 356 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 CC2D2BQ6DHV5 1058 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 RSBN1LQ6PCB5 846 aaPredicted RBP4.16□□□□□ -1.74
BRCA2-206ENST00000544455 MTMR8Q96EF0 704 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 FUT8Q9BYC5 575 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 COL20A1Q9P218 1284 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 DNM3Q9UQ16 869 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 COL4A3BPQ9Y5P4 624 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 ASTN1O14525 1302 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 GOLGA8IPA6NC78 632 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 GOLGA6L9A6NEM1 432 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 GOLGA8JA6NMD2 632 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 KRT86O43790 486 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 SLITRK3O94933 977 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 IPO7O95373 1038 aaKnown RBP4.16□□□□□ -1.74
BRCA2-206ENST00000544455 KCNA3P22001 575 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 ARHGAP44Q17R89 818 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 TAAR1Q96RJ0 339 aa4.16□□□□□ -1.74
BRCA2-206ENST00000544455 SEPT11Q9NVA2 429 aaKnown RBP4.16□□□□□ -1.74
BRCA2-206ENST00000544455 TRIM49P0CI25 452 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 TRIM49CP0CI26 452 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 DLG4P78352 724 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 MKRN4PQ13434 485 aaPredicted RBP4.15□□□□□ -1.74
BRCA2-206ENST00000544455 PDIA5Q14554 519 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 LLGL1Q15334 1064 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 UTP14CQ5TAP6 766 aaKnown RBP4.15□□□□□ -1.74
BRCA2-206ENST00000544455 LDHDQ86WU2 507 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 TTLL6Q8N841 843 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 ZNF341Q9BYN7 854 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 STK17AQ9UEE5 414 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 RGS17Q9UGC6 210 aaPredicted RBP4.15□□□□□ -1.74
BRCA2-206ENST00000544455 PCDHA2Q9Y5H9 948 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 hCG_1984214I3L0E3 225 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 EIF2AK2P19525 551 aaKnown RBP4.15□□□□□ -1.74
BRCA2-206ENST00000544455 KLRC1P26715 233 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 EPS15P42566 896 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 EHHADHQ08426 723 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 MAN2A1Q16706 1144 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 FAM114A1Q8IWE2 563 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 ZNF713Q8N859 430 aaPredicted RBP4.15□□□□□ -1.74
BRCA2-206ENST00000544455 HOOK2Q96ED9 719 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 GPRC5CQ9NQ84 441 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 HDAC9Q9UKV0 1011 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 SAR1BQ9Y6B6 198 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 IGLV3-22A0A075B6J6 115 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 PDE4CQ08493 712 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 TERF2Q15554 542 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 TTC19Q6DKK2 380 aaPredicted RBP4.15□□□□□ -1.74
BRCA2-206ENST00000544455 PDXDC1Q6P996 788 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 CERS3Q8IU89 383 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 C7orf43Q8WVR3 580 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 FEZ1Q99689 392 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 ZNF577Q9BSK1 485 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 VPS18Q9P253 973 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 COL4A5P29400 1685 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 PLIN4Q96Q06 1357 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 ZRANB2O95218 330 aaKnown RBP eCLIP4.15□□□□□ -1.74
BRCA2-206ENST00000544455 COPB2P35606 906 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 CYLC1P35663 651 aaPredicted RBP4.15□□□□□ -1.74
BRCA2-206ENST00000544455 TRIM14Q14142 442 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 SMC1AQ14683 1233 aaKnown RBP4.15□□□□□ -1.74
BRCA2-206ENST00000544455 PHLDB2Q86SQ0 1253 aa4.15□□□□□ -1.74
BRCA2-206ENST00000544455 GUF1Q8N442 669 aaKnown RBP4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms