RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 SCAND1P57086 179 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 SMAD3P84022 425 aaKnown RBP4.95□□□□□ -1.62
SCFD1-207ENST00000544052 TERF2Q15554 542 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 SMAD2Q15796 467 aaKnown RBP4.95□□□□□ -1.62
SCFD1-207ENST00000544052 TIGD5Q53EQ6 642 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 MROH9Q5TGP6 573 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 INTS5Q6P9B9 1019 aaKnown RBP4.95□□□□□ -1.62
SCFD1-207ENST00000544052 MENTQ9BUN1 341 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 CDH19Q9H159 772 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 PDLIM7Q9NR12 457 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 TOPORSQ9NS56 1045 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-207ENST00000544052 TOMM22Q9NS69 142 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 NOB1Q9ULX3 412 aaKnown RBP4.95□□□□□ -1.62
SCFD1-207ENST00000544052 TELO2Q9Y4R8 837 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 TAF6LQ9Y6J9 622 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 K7ESF4 209 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 SLC27A2O14975 620 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 MAP4K4O95819 1239 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-207ENST00000544052 TRHRP34981 398 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-207ENST00000544052 GP2P55259 537 aaKnown RBP4.95□□□□□ -1.62
SCFD1-207ENST00000544052 TBX4P57082 545 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 CORO7P57737 925 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 SESN3P58005 492 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 TMEM132BQ14DG7 1078 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 PCBP2Q15366 365 aaKnown RBP eCLIP4.95□□□□□ -1.621e-6■■■□□ 18.2
SCFD1-207ENST00000544052 ZNF174Q15697 407 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 STEAP3Q658P3 488 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 RIOX2Q8IUF8 465 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 CHPFQ8IZ52 775 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 ANKS4BQ8N8V4 417 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 UHMK1Q8TAS1 419 aaKnown RBP4.95□□□□□ -1.62
SCFD1-207ENST00000544052 FUBP3Q96I24 572 aaKnown RBP eCLIP4.95□□□□□ -1.62
SCFD1-207ENST00000544052 FMNL2Q96PY5 1086 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 PCIF1Q9H4Z3 704 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 CCDC39Q9UFE4 941 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 IP6K2Q9UHH9 426 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 ZNF180Q9UJW8 692 aa4.95□□□□□ -1.62
SCFD1-207ENST00000544052 LUC7L2Q9Y383 392 aaKnown RBP4.95□□□□□ -1.62
SCFD1-207ENST00000544052 FZD9O00144 591 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 KRIT1O00522 736 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 KLF1Q13351 362 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-207ENST00000544052 PDCD1Q15116 288 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 NFXL1Q6ZNB6 911 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 EP400NLQ6ZTU2 488 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 SIRT2Q8IXJ6 389 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 STK11IPQ8N1F8 1099 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 MYO1HQ8N1T3 1032 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 C8orf48Q96LL4 319 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 RHOBTB2Q9BYZ6 727 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 C19orf73Q9NVV2 129 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 ACSL6Q9UKU0 697 aa4.94□□□□□ -1.62
SCFD1-207ENST00000544052 OAS3Q9Y6K5 1087 aaKnown RBP4.94□□□□□ -1.62
SCFD1-207ENST00000544052 A0A1W2PQJ5 194 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 FAM90A27PA6NNH2 459 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 NRDCO43847 1150 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 HIP1RO75146 1068 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 H2AFYO75367 372 aaKnown RBP4.93□□□□□ -1.62
SCFD1-207ENST00000544052 ABLIM3O94929 683 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 ZSCAN20P17040 1043 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-207ENST00000544052 ODF1Q14990 250 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 ESRP1Q6NXG1 681 aaKnown RBP4.93□□□□□ -1.62
SCFD1-207ENST00000544052 GALNT18Q6P9A2 607 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 PGM2L1Q6PCE3 622 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 KCTD1Q719H9 257 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 PDZD8Q8NEN9 1154 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 CLEC4DQ8WXI8 215 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 SP110Q9HB58 689 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 B3GALT1Q9Y5Z6 326 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 NCAPD3P42695 1498 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 TMEM253P0C7T8 217 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 GLI4P10075 376 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 SPINK2P20155 84 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 CYP4F8P98187 520 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 FIGNQ5HY92 759 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 BICRALQ6AI39 1079 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 RASSF3Q86WH2 238 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 C1orf162Q8NEQ5 155 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-207ENST00000544052 TGFBRAP1Q8WUH2 860 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 JPH3Q8WXH2 748 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-207ENST00000544052 RTF1Q92541 710 aaKnown RBP4.93□□□□□ -1.62
SCFD1-207ENST00000544052 FAXDC2Q96IV6 333 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 CHMP4AQ9BY43 222 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 ZMAT4Q9H898 229 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 ADAMTS6Q9UKP5 1117 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 NOC2LQ9Y3T9 749 aaKnown RBP4.93□□□□□ -1.62
SCFD1-207ENST00000544052 SPEF1Q9Y4P9 236 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 ATP23Q9Y6H3 246 aa4.93□□□□□ -1.62
SCFD1-207ENST00000544052 ATAD2BQ9ULI0 1458 aa4.92□□□□□ -1.62
SCFD1-207ENST00000544052 CCDC194A0A1B0GVG4 234 aa4.92□□□□□ -1.62
SCFD1-207ENST00000544052 RASSF10A6NK89 507 aa4.92□□□□□ -1.62
SCFD1-207ENST00000544052 HGSO14964 777 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-207ENST00000544052 SGSM2O43147 1006 aa4.92□□□□□ -1.62
SCFD1-207ENST00000544052 CLASP2O75122 1294 aaKnown RBP4.92□□□□□ -1.62
SCFD1-207ENST00000544052 TAL1P17542 331 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-207ENST00000544052 PTPN1P18031 435 aaKnown RBP4.92□□□□□ -1.62
SCFD1-207ENST00000544052 CCND1P24385 295 aa4.92□□□□□ -1.62
SCFD1-207ENST00000544052 PHC1P78364 1004 aa4.92□□□□□ -1.62
SCFD1-207ENST00000544052 LRRC32Q14392 662 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms