RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PRKCZQ05513 592 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 GRB10Q13322 594 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 ACVR2BQ13705 512 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 ARHGEF6Q15052 776 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 E2F4Q16254 413 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 CCL14Q16627 93 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 LY6KQ17RY6 165 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 TMEM119Q4V9L6 283 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 HYIQ5T013 277 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 TAPT1Q6NXT6 567 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 KANK3Q6NY19 840 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 CCDC62Q6P9F0 684 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 CYFIP1Q7L576 1253 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 RDM1Q8NG50 284 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 NEK9Q8TD19 979 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 ERO1AQ96HE7 468 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 PNMA5Q96PV4 448 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 POLR3CQ9BUI4 534 aaPredicted RBP11.97□□□□□ -0.49
DDB1-221ENST00000543162 KATNBL1Q9H079 304 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 CUEDC2Q9H467 287 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 TUFT1Q9NNX1 390 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 PDGFCQ9NRA1 345 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 FLRT1Q9NZU1 646 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 STK17AQ9UEE5 414 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 DDX41Q9UJV9 622 aaKnown RBP11.97□□□□□ -0.49
DDB1-221ENST00000543162 GABRQQ9UN88 632 aa11.97□□□□□ -0.49
DDB1-221ENST00000543162 RBM47A0AV96 593 aaKnown RBP11.96□□□□□ -0.49
DDB1-221ENST00000543162 POTEB3A0JP26 581 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 SORBS3O60504 671 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 LETM1O95202 739 aaPredicted RBP11.96□□□□□ -0.49
DDB1-221ENST00000543162 ARIH2O95376 493 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 GGPS1O95749 300 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 GNRH1P01148 92 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 SPATA31C1P0DKV0 1188 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 CYP2C19P33261 490 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 ACTR2P61160 394 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 SP4Q02446 784 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 CYP4A11Q02928 519 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 ZSCAN23Q3MJ62 389 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 PDXDC2PQ6P474 469 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 POTEBQ6S5H4 581 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 METTL7BQ6UX53 244 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 CATSPER3Q86XQ3 398 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 TPH2Q8IWU9 490 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 DHX37Q8IY37 1157 aaKnown RBP11.96□□□□□ -0.49
DDB1-221ENST00000543162 SMAP1Q8IYB5 467 aaPredicted RBP11.96□□□□□ -0.49
DDB1-221ENST00000543162 DYDC2Q96IM9 177 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 HSD17B14Q9BPX1 270 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 BCAS3Q9H6U6 928 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 MLXIPQ9HAP2 919 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 RGL1Q9NZL6 768 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 ZHX1Q9UKY1 873 aaPredicted RBP11.96□□□□□ -0.49
DDB1-221ENST00000543162 KIAA1024Q9UPX6 916 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 PCDHA10Q9Y5I2 948 aa11.96□□□□□ -0.49
DDB1-221ENST00000543162 DOCK5Q9H7D0 1870 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.95□□□□□ -0.5
DDB1-221ENST00000543162 POTEFA5A3E0 1075 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 FARP2O94887 1054 aaPredicted RBP11.95□□□□□ -0.5
DDB1-221ENST00000543162 SLITRK3O94933 977 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 P4HBP07237 508 aaKnown RBP11.95□□□□□ -0.5
DDB1-221ENST00000543162 PSAPP07602 524 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 MUTP22033 750 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 ADCYAP1R1P41586 468 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 CAP1Q01518 475 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 IRF5Q13568 498 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 CTTNQ14247 550 aaKnown RBP11.95□□□□□ -0.5
DDB1-221ENST00000543162 ECM1Q16610 540 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 NAALADL2Q58DX5 795 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 CELF3Q5SZQ8 465 aaKnown RBP11.95□□□□□ -0.5
DDB1-221ENST00000543162 MFSD14CQ5VZR4 134 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 IQSEC1Q6DN90 963 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 MIS18BP1Q6P0N0 1132 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 POTEGQ6S5H5 508 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 CKAP2LQ8IYA6 745 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 ELOA2Q8IYF1 753 aaPredicted RBP11.95□□□□□ -0.5
DDB1-221ENST00000543162 TRMT44Q8IYL2 757 aaKnown RBP11.95□□□□□ -0.5
DDB1-221ENST00000543162 KCTD17Q8N5Z5 321 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 ZNF296Q8WUU4 475 aaPredicted RBP11.95□□□□□ -0.5
DDB1-221ENST00000543162 PAGE5Q96GU1 130 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 MAGEF1Q9HAY2 307 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 SRRDQ9UH36 339 aa11.95□□□□□ -0.5
DDB1-221ENST00000543162 CASP8AP2Q9UKL3 1982 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 NOP56O00567 594 aaKnown RBP11.94□□□□□ -0.5
DDB1-221ENST00000543162 GH1P01241 217 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 IGHA2P01877 340 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 AFMP43652 599 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 QARSP47897 775 aaKnown RBP11.94□□□□□ -0.5
DDB1-221ENST00000543162 LAMC2Q13753 1193 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 POSTNQ15063 836 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 CCDC144BQ3MJ40 725 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 PRAMEF19Q5SWL8 479 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 ABHD15Q6UXT9 468 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 KCNK18Q7Z418 384 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 GRAMD1CQ8IYS0 662 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 BANK1Q8NDB2 785 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 LARP4BQ92615 738 aaKnown RBP11.94□□□□□ -0.5
DDB1-221ENST00000543162 RAD54LQ92698 747 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 LXNQ9BS40 222 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 ZSWIM4Q9H7M6 989 aa11.94□□□□□ -0.5
DDB1-221ENST00000543162 BLOC1S4Q9NUP1 217 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms