RNA–Protein interactions for RNA: ENST00000542287.6

ATXN2-215, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-215ENST00000542287 COG2Q14746 738 aa6.49□□□□□ -1.37
ATXN2-215ENST00000542287 FAM110CQ1W6H9 321 aa6.49□□□□□ -1.37
ATXN2-215ENST00000542287 TCP11X2Q5H9J9 407 aa6.49□□□□□ -1.37
ATXN2-215ENST00000542287 CCDC12Q8WUD4 166 aaPredicted RBP6.49□□□□□ -1.37
ATXN2-215ENST00000542287 CHURC1Q8WUH1 139 aa6.49□□□□□ -1.37
ATXN2-215ENST00000542287 MTMR9Q96QG7 549 aa6.49□□□□□ -1.37
ATXN2-215ENST00000542287 TRIM9Q9C026 710 aa6.49□□□□□ -1.37
ATXN2-215ENST00000542287 RPAP3Q9H6T3 665 aaPredicted RBP6.49□□□□□ -1.37
ATXN2-215ENST00000542287 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.49□□□□□ -1.37
ATXN2-215ENST00000542287 LIMA1Q9UHB6 759 aaKnown RBP6.49□□□□□ -1.37
ATXN2-215ENST00000542287 LRRC10BA6NIK2 292 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 LAD1O00515 517 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 N4BP3O15049 544 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 FKTNO75072 461 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 MFAP3LO75121 409 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 RHOBTB3O94955 611 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 COPB1P53618 953 aaKnown RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 SNAP25P60880 206 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 GRB10Q13322 594 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 CRHR2Q13324 411 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 CCDC96Q2M329 555 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 KIAA1755Q5JYT7 1200 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 KCNK18Q7Z418 384 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 PYM1Q9BRP8 204 aaKnown RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 BLOC1S4Q9NUP1 217 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 PPP1R9AQ9ULJ8 1098 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 GPR25O00155 361 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 CNMDO75829 334 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 ADCY7P51828 1080 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 HERVK_113P62684 666 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 ECM1Q16610 540 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 CCDC84Q86UT8 332 aaPredicted RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 IFNLR1Q8IU57 520 aaPredicted RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 SAMD3Q8N6K7 520 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 GIMAP8Q8ND71 665 aaPredicted RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 BANK1Q8NDB2 785 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 REPS2Q8NFH8 660 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 PNMA5Q96PV4 448 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 DUSP9Q99956 384 aaKnown RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 SLF1Q9BQI6 1058 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 PNMA6FA0A0J9YX94 578 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 SPDYE16A6NNV3 312 aaPredicted RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 KIF2AO00139 706 aaPredicted RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 SLU7O95391 586 aaKnown RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 SLC25A27O95847 323 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 CLK2P49760 499 aaKnown RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 ERVK-24P63145 666 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 KCNB1Q14721 858 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 CALCRLQ16602 461 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 ERCC6LQ2NKX8 1250 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 TTI2Q6NXR4 508 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 USP17L6PQ6QN14 398 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 KIAA0895Q8NCT3 520 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 MYCBPQ99417 103 aaPredicted RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 NUP88Q99567 741 aaPredicted RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 P2RX7Q99572 595 aaKnown RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 NCAPGQ9BPX3 1015 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 SRRTQ9BXP5 876 aaKnown RBP6.48□□□□□ -1.37
ATXN2-215ENST00000542287 RMND1Q9NWS8 449 aa6.48□□□□□ -1.37
ATXN2-215ENST00000542287 MYMKA6NI61 221 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 CCNA1P78396 465 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 PDE4DQ08499 809 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 MKRN3Q13064 507 aaKnown RBP6.47□□□□□ -1.37
ATXN2-215ENST00000542287 TRAF1Q13077 416 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 MCM6Q14566 821 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 PKN2Q16513 984 aaKnown RBP6.47□□□□□ -1.37
ATXN2-215ENST00000542287 FCHSD1Q86WN1 690 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 ABRAQ8N0Z2 381 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 PRPF38AQ8NAV1 312 aaKnown RBP6.47□□□□□ -1.37
ATXN2-215ENST00000542287 GLIS3Q8NEA6 775 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 HAS1Q92839 578 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 AK8Q96MA6 479 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 PANX2Q96RD6 677 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 CTAGE1Q96RT6 745 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 RANBP17Q9H2T7 1088 aaKnown RBP6.47□□□□□ -1.37
ATXN2-215ENST00000542287 ZBTB5O15062 677 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 MAPK4P31152 587 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 KLK7P49862 253 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 ASIC1P78348 528 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 SYCP1Q15431 976 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 QRICH1Q2TAL8 776 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 NBPF20Q3BBV1 942 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 FILIP1LQ4L180 1135 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 ANKRD40Q6AI12 368 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 DYMQ7RTS9 669 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 PPFIBP1Q86W92 1011 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 ACRBPQ8NEB7 543 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 KIFC2Q96AC6 838 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 MTMR8Q96EF0 704 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 TRIM47Q96LD4 638 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 RIC8AQ9NPQ8 531 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 LZTFL1Q9NQ48 299 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 LRWD1Q9UFC0 647 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 DDX41Q9UJV9 622 aaKnown RBP6.47□□□□□ -1.37
ATXN2-215ENST00000542287 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.47□□□□□ -1.371e-6■■□□□ 12.1
ATXN2-215ENST00000542287 ADGRG1Q9Y653 693 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 PHLPP2Q6ZVD8 1323 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 ZSCAN12O43309 604 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 ZBED4O75132 1171 aa6.47□□□□□ -1.37
ATXN2-215ENST00000542287 URI1O94763 535 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms