RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TCF7P36402 384 aaPredicted RBP11.08□□□□□ -0.64
YBX3-212ENST00000542002 FXR1P51114 621 aaKnown RBP eCLIP11.08□□□□□ -0.64
YBX3-212ENST00000542002 USP11P51784 963 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 FOSBP53539 338 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 CCL23P55773 120 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 PTPN11Q06124 597 aaPredicted RBP11.08□□□□□ -0.64
YBX3-212ENST00000542002 NR5A1Q13285 461 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 RABEP1Q15276 862 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 PTGISQ16647 500 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 PRR16Q569H4 304 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 MCTP2Q6DN12 878 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 GIMAP8Q8ND71 665 aaPredicted RBP11.08□□□□□ -0.64
YBX3-212ENST00000542002 SEPT1Q8WYJ6 367 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 DHX38Q92620 1227 aaKnown RBP11.08□□□□□ -0.64
YBX3-212ENST00000542002 TNFRSF25Q93038 417 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 WNT8AQ9H1J5 351 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 HIPK3Q9H422 1215 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 CYP3A7-CYP3A51PA0A087WV96 503 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 DDX39AO00148 427 aaKnown RBP11.07□□□□□ -0.64
YBX3-212ENST00000542002 IPO5O00410 1097 aaKnown RBP11.07□□□□□ -0.64
YBX3-212ENST00000542002 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 MSH4O15457 936 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 ATG7O95352 703 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 TDP2O95551 362 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 SMIM10L2AP0DMW4 78 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 SMIM10L2BP0DMW5 78 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 ACRP10323 421 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 CYP3A7P24462 503 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 HOXC8P31273 242 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 ACTR2P61160 394 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 GPNMBQ14956 572 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 INF2Q27J81 1249 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 GALNT17Q6IS24 598 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 TDHQ8IZJ6 230 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 FAM177A1Q8N128 213 aaPredicted RBP11.07□□□□□ -0.64
YBX3-212ENST00000542002 C7orf31Q8N865 590 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 SCLYQ96I15 445 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 ZSCAN31Q96LW9 406 aaPredicted RBP11.07□□□□□ -0.64
YBX3-212ENST00000542002 JPH1Q9HDC5 661 aaPredicted RBP11.07□□□□□ -0.64
YBX3-212ENST00000542002 SETD4Q9NVD3 440 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 SLC9A2Q9UBY0 812 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 NFASCO94856 1347 aa11.07□□□□□ -0.64
YBX3-212ENST00000542002 IGKV6D-21A0A0A0MT36 114 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 BTBD18B2RXH4 712 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 LGR5O75473 907 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 SUPT20HL2P0C7V6 817 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 ADAM17P78536 824 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 FPGSQ05932 587 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 TRIM71Q2Q1W2 868 aaKnown RBP11.06□□□□□ -0.64
YBX3-212ENST00000542002 KRT40Q6A162 431 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 ABHD15Q6UXT9 468 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 WASF1Q92558 559 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 ZBTB10Q96DT7 871 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 MBOAT7Q96N66 472 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 SDF4Q9BRK5 362 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 LLPHQ9BRT6 129 aaKnown RBP11.06□□□□□ -0.64
YBX3-212ENST00000542002 ZNF577Q9BSK1 485 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 KATNAL1Q9BW62 490 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 SCN10AQ9Y5Y9 1956 aa11.06□□□□□ -0.64
YBX3-212ENST00000542002 A0A1W2PPC1 479 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 WNT7AO00755 349 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 TREHO43280 583 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 SLC37A4O43826 429 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 MMP1P03956 469 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 IQCF3P0C7M6 154 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 ATP4AP20648 1035 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 MARK3P27448 753 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 GUCY1B3Q02153 619 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 NONOQ15233 471 aaKnown RBP eCLIP11.05□□□□□ -0.64
YBX3-212ENST00000542002 Q4G0T1 1027 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 TMEM240Q5SV17 173 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 MARCH8Q5T0T0 291 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 TRAF7Q6Q0C0 670 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 PIK3AP1Q6ZUJ8 805 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 ZNF365Q70YC5 407 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 SLC5A5Q92911 643 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 LRCH3Q96II8 777 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 TMX3Q96JJ7 454 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.05□□□□□ -0.643e-19■□□□□ 11.3
YBX3-212ENST00000542002 OSBPL7Q9BZF2 842 aa11.05□□□□□ -0.64
YBX3-212ENST00000542002 UPF2Q9HAU5 1272 aaKnown RBP11.05□□□□□ -0.64
YBX3-212ENST00000542002 SH2B1Q9NRF2 756 aaPredicted RBP11.05□□□□□ -0.64
YBX3-212ENST00000542002 C17orf102A2RUQ5 167 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 XBP1P17861 261 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 TCTN1Q2MV58 587 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 LRIT3Q3SXY7 679 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 SWSAP1Q6NVH7 229 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 B3GNT9Q6UX72 402 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 KRT25Q7Z3Z0 450 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 SERINC5Q86VE9 423 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 TMEM199Q8N511 208 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 ETNPPLQ8TBG4 499 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 LMBR1Q8WVP7 490 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 GLG1Q92896 1179 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 SMARCAD1Q9H4L7 1026 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 TBC1D22BQ9NU19 505 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 LTBP2Q14767 1821 aa11.04□□□□□ -0.64
YBX3-212ENST00000542002 MYH7BA7E2Y1 1941 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 CCDC194A0A1B0GVG4 234 aa11.03□□□□□ -0.64
YBX3-212ENST00000542002 ST18O60284 1047 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms