RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 FAM86B2P0C5J1 330 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 MRPL12P52815 198 aaKnown RBP8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 FAM160A1Q05DH4 1040 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 MOGSQ13724 837 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 LONRF3Q496Y0 759 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 PRR16Q569H4 304 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 RESP18Q5W5W9 173 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 ATL3Q6DD88 541 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 CATSPERGQ6ZRH7 1159 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 ARMC9Q7Z3E5 817 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 ERO1BQ86YB8 467 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 SMAP1Q8IYB5 467 aaPredicted RBP8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 LRRC15Q8TF66 581 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 DHX58Q96C10 678 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 GBA2Q9HCG7 927 aaPredicted RBP8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 TXNRD2Q9NNW7 524 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 ZNF214Q9UL59 606 aaPredicted RBP8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 SYNPO2Q9UMS6 1093 aa8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 CTDP1Q9Y5B0 961 aaPredicted RBP8.74□□□□□ -1.01
AC005840.3-201ENST00000541888 A0A0G2JLL6 359 aaPredicted RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 SPDYE3A6NKU9 549 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 C19orf81C9J6K1 198 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 hCG_1984214I3L0E3 225 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 CUTAO60888 179 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 STAT3P40763 770 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 ARHGAP4P98171 946 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 PNOCQ13519 176 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 COG2Q14746 738 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 KARSQ15046 597 aaKnown RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 PPP1R26Q5T8A7 1209 aaPredicted RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 LCE2AQ5TA79 106 aaPredicted RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 GALNT17Q6IS24 598 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 PRRT2Q7Z6L0 340 aaPredicted RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 ZNF713Q8N859 430 aaPredicted RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 REPS2Q8NFH8 660 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 TRERF1Q96PN7 1200 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 RBSNQ9H1K0 784 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 CLSTN2Q9H4D0 955 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 SERTAD1Q9UHV2 236 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 KCNH3Q9ULD8 1083 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 SRPRBQ9Y5M8 271 aaKnown RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 A0A0G2JMZ2 1700 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 KINO60870 393 aaKnown RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 EIF2AK2P19525 551 aaKnown RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 CMA1P23946 247 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 MSNP26038 577 aaKnown RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 SYKP43405 635 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 AFMP43652 599 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 RPS6P62753 249 aaKnown RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 PPATQ06203 517 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 FSTL1Q12841 308 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 LDLRAD1Q5T700 205 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 HAS1Q92839 578 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 C12orf42Q96LP6 360 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 TAAR1Q96RJ0 339 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 ASCC2Q9H1I8 757 aaPredicted RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 RNF146Q9NTX7 359 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 DDX25Q9UHL0 483 aaKnown RBP8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 PRDM4Q9UKN5 801 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 CEP131Q9UPN4 1083 aa8.73□□□□□ -1.01
AC005840.3-201ENST00000541888 ZNFX1Q9P2E3 1918 aaKnown RBP8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 A0A1W2PQ27 194 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 A0A1W2PQ64 194 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 A0A1W2PQD8 194 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 GCOM1H8Y6P7 765 aaPredicted RBP8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 ZBED4O75132 1171 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 OR52Z1P0C646 297 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 POLR2MP0CAP2 368 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 HUNKP57058 714 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 IRX3P78415 501 aaPredicted RBP8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 BAATQ14032 418 aaPredicted RBP8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 DHX8Q14562 1220 aaKnown RBP8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 MAP3K11Q16584 847 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 CALCRLQ16602 461 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 WDR78Q5VTH9 848 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 GPAT2Q6NUI2 795 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 JMYQ8N9B5 988 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 SDF4Q9BRK5 362 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 HPSEQ9Y251 543 aa8.72□□□□□ -1.01
AC005840.3-201ENST00000541888 RBAK-RBAKDNI3L0D1 243 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 DDX39AO00148 427 aaKnown RBP8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 PLA2G6O60733 806 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 MYCLP12524 364 aaPredicted RBP8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 TRAPPC10P48553 1259 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 HERVK_113P62684 666 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 CNTN2Q02246 1040 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 NFX1Q12986 1120 aaKnown RBP8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 PPIL2Q13356 520 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 INTS6LQ5JSJ4 861 aaKnown RBP8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 LRSAM1Q6UWE0 723 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 DTHD1Q6ZMT9 781 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 TRMT1LQ7Z2T5 733 aaKnown RBP8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 RGS22Q8NE09 1264 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 SYAP1Q96A49 352 aaPredicted RBP8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 LENG9Q96B70 501 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 BLZF1Q9H2G9 400 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 BCAS3Q9H6U6 928 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 TTC12Q9H892 705 aaPredicted RBP8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 GINM1Q9NU53 330 aa8.71□□□□□ -1.01
AC005840.3-201ENST00000541888 MRPL11Q9Y3B7 192 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms