RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PAK2Q13177 524 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 NBPF9Q3BBW0 867 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 MEI1Q5TIA1 1274 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 ALS2CLQ60I27 953 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 UHMK1Q8TAS1 419 aaKnown RBP11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 MYCBPAPQ8TBZ2 947 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 MDM1Q8TC05 714 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 UBLCP1Q8WVY7 318 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 JPH2Q9BR39 696 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 CHORDC1Q9UHD1 332 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 SMIM23A6NLE4 172 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 DAPK3O43293 454 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 PPP1R37O75864 691 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 PDHBP11177 359 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 FNTAP49354 379 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 LLGL1Q15334 1064 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 ZCWPW2Q504Y3 356 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 NLRP14Q86W24 1093 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 SCFD1Q8WVM8 642 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 SETDB2Q96T68 719 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 SPZ1Q9BXG8 430 aa11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 RTFDC1Q9BY42 306 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDC42SE1-207ENST00000540998 SERPING1P05155 500 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 EPB41P11171 864 aaKnown RBP11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 AKR1B1P15121 316 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 POLD1P28340 1107 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 TM4SF1P30408 202 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 RFC4P35249 363 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 EPS15P42566 896 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 ADCY7P51828 1080 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 SLC18A3Q16572 532 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 TCERG1LQ5VWI1 586 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 MCTP2Q6DN12 878 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 USP38Q8NB14 1042 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 RBM46Q8TBY0 533 aaKnown RBP11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 ATP6V1G3Q96LB4 118 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 TSG101Q99816 390 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 TRIM51Q9BSJ1 452 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 MXD3Q9BW11 206 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 RTCBQ9Y3I0 505 aaKnown RBP11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 CCDC88AQ3V6T2 1871 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 SFI1A8K8P3 1242 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 RSPH10B2B2RC85 870 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 KIAA0754O94854 1291 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 RSPH10BP0C881 870 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 FKBP3Q00688 224 aaKnown RBP11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 KCNH2Q12809 1159 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 ITGB3BPQ13352 177 aaPredicted RBP11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 GBP6Q6ZN66 633 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 GPBP1Q86WP2 473 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 KSR1Q8IVT5 923 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 ANKS1AQ92625 1134 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 EPN3Q9H201 632 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 CEP72Q9P209 647 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 DDX25Q9UHL0 483 aaKnown RBP11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 FBXL5Q9UKA1 691 aa11.37□□□□□ -0.59
CDC42SE1-207ENST00000540998 GNPATO15228 680 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 CLIC2O15247 247 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 MEFVO15553 781 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 TTI1O43156 1089 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 MDH1P40925 334 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 CASP4P49662 377 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 LRRC63Q05C16 580 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 ITIH3Q06033 890 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 SF3B2Q13435 895 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 ADAM9Q13443 819 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 ASIC2Q16515 512 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 CDC37Q16543 378 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 TMEM266Q2M3C6 531 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 AADACL2Q6P093 401 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 DPP8Q6V1X1 898 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 KDM7AQ6ZMT4 941 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 MAGEF1Q9HAY2 307 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 COL22A1Q8NFW1 1626 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 PHF20L1A8MW92 1017 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 USP17L10C9JJH3 530 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 CTNNA1P35221 906 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 CYP4A11Q02928 519 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 PABPC4Q13310 644 aaKnown RBP eCLIP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 ODF2Q5BJF6 829 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 GALNT17Q6IS24 598 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 METTL13Q8N6R0 699 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 OSGEPQ9NPF4 335 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 MYH7BA7E2Y1 1941 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 PVALEFA0A1B0GWK0 134 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 SSU72P8A0A1W2PR75 194 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 OPLAHO14841 1288 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 SART1O43290 800 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 ECM2O94769 699 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 KRT18P05783 430 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 NR2F2P24468 414 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 ZNF844Q08AG5 666 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 ZNF211Q13398 564 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 PRPF4BQ13523 1007 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 RPS6KA1Q15418 735 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 TRIM59Q8IWR1 403 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 GANQ9H2C0 597 aa11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 NOVA2Q9UNW9 492 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-207ENST00000540998 MED24O75448 989 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms