RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	DKC1	O60832	514 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	DEXI	O95424	95 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	VGLL4	Q14135	290 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TSR1	Q2NL82	804 aa	Known RBP	6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SPRYD7	Q5W111	196 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GALNT17	Q6IS24	598 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	KCNV1	Q6PIU1	500 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MSL3	Q8N5Y2	521 aa	Known RBP	6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	OR8K1	Q8NGG5	319 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CDK5RAP3	Q96JB5	506 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MTR	Q99707	1265 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	LRRC1	Q9BTT6	524 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	VIPAS39	Q9H9C1	493 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TCP11L1	Q9NUJ3	509 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MTMR4	Q9NYA4	1195 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TLL2	Q9Y6L7	1015 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MYPN	Q86TC9	1320 aa		6.26	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	DDTL	A6NHG4	134 aa	Predicted RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FAM196B	A6NMK8	535 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783		H0YHG0	523 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GCOM1	H8Y6P7	765 aa	Predicted RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TRAF5	O00463	557 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	POLR2M	P0CAP2	368 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ERCC3	P19447	782 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CTCF	P49711	727 aa	Predicted RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PMS1	P54277	932 aa	Known RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PAK1	Q13153	545 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PTGDR	Q13258	359 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	WDR59	Q6PJI9	974 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SGMS1	Q86VZ5	419 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ANKRD13C	Q8N6S4	541 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ZNF579	Q8NAF0	562 aa	Known RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FANCB	Q8NB91	859 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ANKRD20A12P	Q8NF67	263 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	VTI1A	Q96AJ9	217 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TEX13B	Q9BXU2	312 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	LIMA1	Q9UHB6	759 aa	Known RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ABCB11	O95342	1321 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CYP2D7	A0A087X1C5	515 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TCRBV5S4A2T	A0A5A2	114 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SHTN1	A0MZ66	631 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FKTN	O75072	461 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TUBB	P07437	444 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FCER1A	P12319	257 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MCM7	P33993	719 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PRCP	P42785	496 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TUBB4B	P68371	445 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CCDC174	Q6PII3	467 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SH3RF1	Q7Z6J0	888 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ANKRD23	Q86SG2	305 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ELOA2	Q8IYF1	753 aa	Predicted RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SAMD3	Q8N6K7	520 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TSEN2	Q8NCE0	465 aa	Known RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ZKSCAN4	Q969J2	545 aa	Predicted RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CDHR1	Q96JP9	859 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GSDMA	Q96QA5	445 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	JPH2	Q9BR39	696 aa	Predicted RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	HAUS4	Q9H6D7	363 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MYO1A	Q9UBC5	1043 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PGAP2	Q9UHJ9	254 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	AGTPBP1	Q9UPW5	1226 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NDUFAB1	O14561	156 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ADAMTS3	O15072	1205 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PTPRA	P18433	802 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RASA1	P20936	1047 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	STAT3	P40763	770 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ADCY7	P51828	1080 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SPICE1	Q8N0Z3	855 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CHST13	Q8NET6	341 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CEP95	Q96GE4	821 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NUDT12	Q9BQG2	462 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MROH8	Q9H579	483 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TMX2	Q9Y320	296 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	WTIP	A6NIX2	430 aa	Predicted RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ASB14	A6NK59	587 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NCK2	O43639	380 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PLEKHA8P1	O95397	391 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MYCN	P04198	464 aa	Predicted RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PLEK	P08567	350 aa	Predicted RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PDE4D	Q08499	809 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PPFIA1	Q13136	1202 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RNF187	Q5TA31	235 aa	Predicted RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PPP4R3A	Q6IN85	833 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	IRF2BP1	Q8IU81	584 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ERMN	Q8TAM6	284 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SOCS4	Q8WXH5	440 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SECISBP2L	Q93073	1101 aa	Known RBP	6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	AP5M1	Q9H0R1	490 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CENPH	Q9H3R5	247 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ACAD9	Q9H845	621 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MLXIP	Q9HAP2	919 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	STK24	Q9Y6E0	443 aa		6.25	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	COL24A1	Q17RW2	1714 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SRCAP	Q6ZRS2	3230 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ATRNL1	Q5VV63	1379 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ESYT3	A0FGR9	886 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NKRF	O15226	690 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	EIF3H	O15372	352 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CP	P00450	1065 aa		6.24	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GNRH1	P01148	92 aa		6.24	□□□□□ -1.41

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