RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 GLIS3Q8NEA6 775 aa27.38■■□□□ 1.97
TTC3-225ENST00000540756 POLD4Q9HCU8 107 aa27.38■■□□□ 1.97
TTC3-225ENST00000540756 TUFT1Q9NNX1 390 aa27.38■■□□□ 1.97
TTC3-225ENST00000540756 STK24Q9Y6E0 443 aa27.38■■□□□ 1.97
TTC3-225ENST00000540756 PGK2P07205 417 aa27.38■■□□□ 1.97
TTC3-225ENST00000540756 PAK1Q13153 545 aa27.38■■□□□ 1.97
TTC3-225ENST00000540756 SPATA1Q5VX52 437 aa27.38■■□□□ 1.97
TTC3-225ENST00000540756 XRRA1Q6P2D8 792 aa27.38■■□□□ 1.97
TTC3-225ENST00000540756 TELO2Q9Y4R8 837 aa27.38■■□□□ 1.97
TTC3-225ENST00000540756 PFASO15067 1338 aa27.37■■□□□ 1.97
TTC3-225ENST00000540756 PVALEFA0A1B0GWK0 134 aa27.37■■□□□ 1.97
TTC3-225ENST00000540756 SOWAHBA6NEL2 793 aa27.37■■□□□ 1.97
TTC3-225ENST00000540756 CHADLQ6NUI6 762 aa27.37■■□□□ 1.97
TTC3-225ENST00000540756 MIER3Q7Z3K6 550 aa27.37■■□□□ 1.97
TTC3-225ENST00000540756 FAM43AQ8N2R8 423 aa27.37■■□□□ 1.97
TTC3-225ENST00000540756 SYT2Q8N9I0 419 aaPredicted RBP27.37■■□□□ 1.97
TTC3-225ENST00000540756 RWDD2AQ9UIY3 292 aa27.37■■□□□ 1.97
TTC3-225ENST00000540756 CCNE2O96020 404 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 ALDH5A1P51649 535 aaPredicted RBP27.36■■□□□ 1.97
TTC3-225ENST00000540756 ERVK-9P63128 1117 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 ERVK-24P63145 666 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 EHHADHQ08426 723 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 MRFAP1L1Q96HT8 127 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 ZNF830Q96NB3 372 aaPredicted RBP27.36■■□□□ 1.97
TTC3-225ENST00000540756 PTPN18Q99952 460 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 LXNQ9BS40 222 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 PORCNQ9H237 461 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 TRPM7Q96QT4 1865 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 SORBS3O60504 671 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 PTPN21Q16825 1174 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 DRC7Q8IY82 874 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 CCDC47Q96A33 483 aaKnown RBP27.36■■□□□ 1.97
TTC3-225ENST00000540756 NAP1L5Q96NT1 182 aaPredicted RBP27.36■■□□□ 1.97
TTC3-225ENST00000540756 RUSC1Q9BVN2 902 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 FGFBP2Q9BYJ0 223 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 LRRC27Q9C0I9 530 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 TBC1D22BQ9NU19 505 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 SAMM50Q9Y512 469 aa27.36■■□□□ 1.97
TTC3-225ENST00000540756 POTEB2H3BUK9 544 aa27.35■■□□□ 1.97
TTC3-225ENST00000540756 HUNKP57058 714 aa27.35■■□□□ 1.97
TTC3-225ENST00000540756 COASYQ13057 564 aa27.35■■□□□ 1.97
TTC3-225ENST00000540756 WDR78Q5VTH9 848 aa27.35■■□□□ 1.97
TTC3-225ENST00000540756 DNERQ8NFT8 737 aa27.35■■□□□ 1.97
TTC3-225ENST00000540756 SMCR8Q8TEV9 937 aaPredicted RBP27.35■■□□□ 1.97
TTC3-225ENST00000540756 GPRASP2Q96D09 838 aa27.35■■□□□ 1.97
TTC3-225ENST00000540756 PANK4Q9NVE7 773 aa27.35■■□□□ 1.97
TTC3-225ENST00000540756 TBC1D7Q9P0N9 293 aa27.35■■□□□ 1.97
TTC3-225ENST00000540756 ZNFX1Q9P2E3 1918 aaKnown RBP27.35■■□□□ 1.97
TTC3-225ENST00000540756 EYA4O95677 639 aa27.34■■□□□ 1.97
TTC3-225ENST00000540756 SLC25A27O95847 323 aa27.34■■□□□ 1.97
TTC3-225ENST00000540756 FAM133AQ8N9E0 248 aa27.34■■□□□ 1.97
TTC3-225ENST00000540756 EFCC1Q9HA90 598 aa27.34■■□□□ 1.97
TTC3-225ENST00000540756 SERPINC1P01008 464 aa27.34■■□□□ 1.97
TTC3-225ENST00000540756 KCNA2P16389 499 aa27.34■■□□□ 1.97
TTC3-225ENST00000540756 LRRC41Q15345 812 aa27.34■■□□□ 1.97
TTC3-225ENST00000540756 NLRX1Q86UT6 975 aa27.34■■□□□ 1.97
TTC3-225ENST00000540756 ANKRD13CQ8N6S4 541 aa27.34■■□□□ 1.97
TTC3-225ENST00000540756 MAF1Q9H063 256 aa27.34■■□□□ 1.97
TTC3-225ENST00000540756 PNMA3Q9UL41 463 aa27.34■■□□□ 1.97
TTC3-225ENST00000540756 DCAF8L1A6NGE4 600 aa27.33■■□□□ 1.97
TTC3-225ENST00000540756 SP2Q02086 613 aa27.33■■□□□ 1.97
TTC3-225ENST00000540756 GIT2Q14161 759 aa27.33■■□□□ 1.97
TTC3-225ENST00000540756 CCDC144BQ3MJ40 725 aa27.33■■□□□ 1.97
TTC3-225ENST00000540756 FGD4Q96M96 766 aa27.33■■□□□ 1.97
TTC3-225ENST00000540756 IWS1Q96ST2 819 aa27.33■■□□□ 1.97
TTC3-225ENST00000540756 BMP2KQ9NSY1 1161 aaPredicted RBP27.33■■□□□ 1.97
TTC3-225ENST00000540756 KRT18P05783 430 aaKnown RBP27.33■■□□□ 1.96
TTC3-225ENST00000540756 CDK11BP21127 795 aaKnown RBP27.33■■□□□ 1.96
TTC3-225ENST00000540756 STXBP2Q15833 593 aa27.33■■□□□ 1.96
TTC3-225ENST00000540756 UGCGQ16739 394 aa27.33■■□□□ 1.96
TTC3-225ENST00000540756 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.33■■□□□ 1.96
TTC3-225ENST00000540756 REEP2Q9BRK0 252 aa27.33■■□□□ 1.96
TTC3-225ENST00000540756 RSPH10B2B2RC85 870 aa27.32■■□□□ 1.96
TTC3-225ENST00000540756 RSPH10BP0C881 870 aa27.32■■□□□ 1.96
TTC3-225ENST00000540756 UBASH3AP57075 661 aa27.32■■□□□ 1.96
TTC3-225ENST00000540756 CDKAL1Q5VV42 579 aa27.32■■□□□ 1.96
TTC3-225ENST00000540756 EEF2KMTQ96G04 330 aa27.32■■□□□ 1.96
TTC3-225ENST00000540756 INTS13Q9NVM9 706 aa27.32■■□□□ 1.96
TTC3-225ENST00000540756 WDR81Q562E7 1941 aa27.32■■□□□ 1.96
TTC3-225ENST00000540756 PCNTO95613 3336 aa27.31■■□□□ 1.96
TTC3-225ENST00000540756 ZBTB48P10074 688 aaPredicted RBP27.31■■□□□ 1.96
TTC3-225ENST00000540756 CDC25BP30305 580 aa27.31■■□□□ 1.96
TTC3-225ENST00000540756 RINT1Q6NUQ1 792 aa27.31■■□□□ 1.96
TTC3-225ENST00000540756 SEPT14Q6ZU15 432 aa27.31■■□□□ 1.96
TTC3-225ENST00000540756 ZHX3Q9H4I2 956 aa27.31■■□□□ 1.96
TTC3-225ENST00000540756 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.31■■□□□ 1.96
TTC3-225ENST00000540756 SPATA31C2B4DYI2 1134 aa27.31■■□□□ 1.96
TTC3-225ENST00000540756 PSMA7O14818 248 aa27.31■■□□□ 1.96
TTC3-225ENST00000540756 SP4Q02446 784 aa27.31■■□□□ 1.96
TTC3-225ENST00000540756 TRMT1LQ7Z2T5 733 aaKnown RBP27.31■■□□□ 1.96
TTC3-225ENST00000540756 ANKRD23Q86SG2 305 aa27.31■■□□□ 1.96
TTC3-225ENST00000540756 MMP19Q99542 508 aa27.31■■□□□ 1.96
TTC3-225ENST00000540756 PCDHA2Q9Y5H9 948 aa27.31■■□□□ 1.96
TTC3-225ENST00000540756 MCM3APO60318 1980 aa27.31■■□□□ 1.96
TTC3-225ENST00000540756 MAFGO15525 162 aa27.3■■□□□ 1.96
TTC3-225ENST00000540756 EIF3JO75822 258 aaKnown RBP27.3■■□□□ 1.96
TTC3-225ENST00000540756 P4HBP07237 508 aaKnown RBP27.3■■□□□ 1.96
TTC3-225ENST00000540756 STIM1Q13586 685 aa27.3■■□□□ 1.96
TTC3-225ENST00000540756 TPD52L1Q16890 204 aaPredicted RBP27.3■■□□□ 1.96
TTC3-225ENST00000540756 ANKRD40Q6AI12 368 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms