RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 JMJD4Q9H9V9 463 aa13.52□□□□□ -0.25
NPC1-202ENST00000540608 POLLQ9UGP5 575 aa13.52□□□□□ -0.25
NPC1-202ENST00000540608 AFF2P51816 1311 aa13.52□□□□□ -0.25
NPC1-202ENST00000540608 KDM3AQ9Y4C1 1321 aa13.52□□□□□ -0.25
NPC1-202ENST00000540608 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.51□□□□□ -0.25
NPC1-202ENST00000540608 ZNF233A6NK53 670 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 BTNL10A8MVZ5 291 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 CES2O00748 559 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 MARCH6O60337 910 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 KRT14P02533 472 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 KLHL30Q0D2K2 578 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 UBE2SQ16763 222 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 C1orf131Q8NDD1 294 aaKnown RBP13.51□□□□□ -0.25
NPC1-202ENST00000540608 WHAMMQ8TF30 809 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 CASKIN2Q8WXE0 1202 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 FGFBP2Q9BYJ0 223 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 KCTD10Q9H3F6 313 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 GPCPD1Q9NPB8 672 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 TBC1D7Q9P0N9 293 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 ZSCAN5CA6NGD5 496 aaPredicted RBP13.51□□□□□ -0.25
NPC1-202ENST00000540608 GCFC2P16383 781 aaKnown RBP13.51□□□□□ -0.25
NPC1-202ENST00000540608 RAPGEF1Q13905 1077 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 ASIC2Q16515 512 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 C10orf76Q5T2E6 689 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 KDM7AQ6ZMT4 941 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 LRRC47Q8N1G4 583 aaKnown RBP13.51□□□□□ -0.25
NPC1-202ENST00000540608 MICALL1Q8N3F8 863 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 ADAMTS1Q9UHI8 967 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 TMEM59LQ9UK28 342 aa13.51□□□□□ -0.25
NPC1-202ENST00000540608 IGKV6D-41A0A0C4DH26 115 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 ESYT3A0FGR9 886 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 SSBP05455 408 aaKnown RBP eCLIP13.5□□□□□ -0.25
NPC1-202ENST00000540608 MYBP10242 640 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 MRPL12P52815 198 aaKnown RBP13.5□□□□□ -0.25
NPC1-202ENST00000540608 KCTD16Q68DU8 428 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 NELFCDQ8IXH7 590 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 ADGRF4Q8IZF3 695 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 SH2D3CQ8N5H7 860 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 USP38Q8NB14 1042 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 SCFD1Q8WVM8 642 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.5□□□□□ -0.256e-6■■■■■ 28.1
NPC1-202ENST00000540608 CUL5Q93034 780 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 GANQ9H2C0 597 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 RABEP2Q9H5N1 569 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 EMILIN3Q9NT22 766 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 GAKO14976 1311 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 E9PMD0 336 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 SLC26A4O43511 780 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 PPP1R11O60927 126 aaPredicted RBP13.5□□□□□ -0.25
NPC1-202ENST00000540608 PLA2G4BP0C869 781 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 DNA2P51530 1060 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 TNNC1P63316 161 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 ARID5AQ03989 594 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 PDCLQ13371 301 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 ADAM9Q13443 819 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 HERC4Q5GLZ8 1057 aaPredicted RBP13.5□□□□□ -0.25
NPC1-202ENST00000540608 ICE2Q659A1 982 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 B4GALNT4Q76KP1 1039 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 CLEC10AQ8IUN9 316 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 FAM133AQ8N9E0 248 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 EIF1ADQ8N9N8 165 aaKnown RBP13.5□□□□□ -0.25
NPC1-202ENST00000540608 TBC1D16Q8TBP0 767 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 GJA10Q969M2 543 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 PACSIN1Q9BY11 444 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 KIAA1024Q9UPX6 916 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 ATAD5Q96QE3 1844 aa13.5□□□□□ -0.25
NPC1-202ENST00000540608 ZEB2O60315 1214 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 ONECUT3O60422 494 aaPredicted RBP13.49□□□□□ -0.25
NPC1-202ENST00000540608 ERLIN2O94905 339 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 SERPINB2P05120 415 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 GYS1P13807 737 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 GUCY2FP51841 1108 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 EIF6P56537 245 aaKnown RBP13.49□□□□□ -0.25
NPC1-202ENST00000540608 GABPAQ06546 454 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 ZNF543Q08ER8 600 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 EDRF1Q3B7T1 1238 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 PPP4R3CPQ6ZMV5 832 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 NAP1L4Q99733 375 aaKnown RBP13.49□□□□□ -0.25
NPC1-202ENST00000540608 PACSIN2Q9UNF0 486 aaPredicted RBP13.49□□□□□ -0.25
NPC1-202ENST00000540608 NDUFAB1O14561 156 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 KCNH2Q12809 1159 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 PICALMQ13492 652 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 RPS6KA1Q15418 735 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 TAF4BQ92750 862 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 RNPC3Q96LT9 517 aaKnown RBP13.49□□□□□ -0.25
NPC1-202ENST00000540608 KANSL2Q9H9L4 492 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 SWAP70Q9UH65 585 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 TRPC5Q9UL62 973 aaPredicted RBP13.49□□□□□ -0.25
NPC1-202ENST00000540608 DAGLAQ9Y4D2 1042 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 CETN3O15182 167 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 RAD51CO43502 376 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 AKR1B1P15121 316 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 EPS15P42566 896 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 ATP1A2P50993 1020 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 IRF2BP2Q7Z5L9 587 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 GPBP1Q86WP2 473 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 SPATS2Q86XZ4 545 aaKnown RBP13.49□□□□□ -0.25
NPC1-202ENST00000540608 RBM17Q96I25 401 aaKnown RBP13.49□□□□□ -0.25
NPC1-202ENST00000540608 GJD4Q96KN9 370 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms