RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 GTF2IRD1Q9UHL9 959 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 ANAPC4Q9UJX5 808 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 PCDHGC5Q9Y5F6 944 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 UPP2O95045 317 aa10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 MMP1P03956 469 aa10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 ALAS1P13196 640 aa10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 PTH1RQ03431 593 aa10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 COL9A2Q14055 689 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 MBTPS1Q14703 1052 aa10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 TRIM71Q2Q1W2 868 aaKnown RBP10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 BMP2KLQ5H9B9 411 aa10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 SMYD5Q6GMV2 418 aa10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 FAM160B2Q86V87 743 aa10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 KCNG4Q8TDN1 519 aa10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 MPHOSPH6Q99547 160 aaKnown RBP10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 PLVAPQ9BX97 442 aa10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 MKNK2Q9HBH9 465 aa10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 CLIP2Q9UDT6 1046 aa10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRAPPC1-202ENST00000540486 IGKV6D-41A0A0C4DH26 115 aa10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 SGSM2O43147 1006 aa10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 BMP3P12645 472 aa10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 CASTP20810 708 aaKnown RBP10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 ALDH5A1P51649 535 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 STAT2P52630 851 aa10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 MFAP1P55081 439 aaKnown RBP10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 HAND2P61296 217 aa10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 NSMFQ6X4W1 530 aa10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 ZNF444Q8N0Y2 327 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 C7orf31Q8N865 590 aa10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 GMCL1P1Q8NEA9 526 aa10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 SUSD6Q92537 303 aa10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 SEPT8Q92599 483 aa10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 CLP1Q92989 425 aaKnown RBP10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 DSCC1Q9BVC3 393 aa10.35□□□□□ -0.75
TRAPPC1-202ENST00000540486 MICAL3Q7RTP6 2002 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 CEP250Q9BV73 2442 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 FSD2A1L4K1 749 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 RSPH10B2B2RC85 870 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 TMEM232C9JQI7 657 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 PLA2G6O60733 806 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 LINC00271P0C7V0 271 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 RSPH10BP0C881 870 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 TXNP10599 105 aaKnown RBP10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 SDHBP21912 280 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 TFAP4Q01664 338 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 PDE4BQ07343 736 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 MTMR3Q13615 1198 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 NAALADL2Q58DX5 795 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 MUM1L1Q5H9M0 696 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 KREMEN2Q8NCW0 462 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 NEDD1Q8NHV4 660 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 STAG1Q8WVM7 1258 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 RUFY2Q8WXA3 655 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 KAT2BQ92831 832 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 P2RX5Q93086 422 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 PURBQ96QR8 312 aaKnown RBP10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 IFIH1Q9BYX4 1025 aaKnown RBP10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 IL17RBQ9NRM6 502 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 HDAC6Q9UBN7 1215 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 SORCS3Q9UPU3 1222 aa10.34□□□□□ -0.75
TRAPPC1-202ENST00000540486 ZMYM6O95789 1325 aa10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 B4DLN1 442 aa10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 ARHGAP33O14559 1287 aa10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 ZNF213O14771 459 aa10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 SLC3A2P08195 630 aaKnown RBP10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 MRPL12P52815 198 aaKnown RBP10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 PDE4DQ08499 809 aa10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 CAMK1Q14012 370 aa10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 COPS5Q92905 334 aa10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 MAP4K1Q92918 833 aa10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 KATNAL1Q9BW62 490 aa10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 MFSD1Q9H3U5 465 aa10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 PLAGL2Q9UPG8 496 aa10.33□□□□□ -0.76
TRAPPC1-202ENST00000540486 ORC4O43929 436 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 NMT2O60551 498 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 TTLL1O95922 423 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 MMP3P08254 477 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 BAATQ14032 418 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 ACAP1Q15027 740 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 ANGPT1Q15389 498 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 DGKDQ16760 1214 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 RSPO4Q2I0M5 234 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 KIAA0319Q5VV43 1072 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 SLFN13Q68D06 897 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 TBC1D10CQ8IV04 446 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 AFG1LQ8WV93 481 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 APBB2Q92870 758 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 CEP95Q96GE4 821 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 ESYT1Q9BSJ8 1104 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 ZNF287Q9HBT7 754 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 MTMR4Q9NYA4 1195 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 BARX2Q9UMQ3 279 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 NR2E1Q9Y466 385 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 MYH8P13535 1937 aa10.32□□□□□ -0.76
TRAPPC1-202ENST00000540486 MAP1BP46821 2468 aaKnown RBP10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 BRD1O95696 1058 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 GLP2RO95838 553 aa10.31□□□□□ -0.76
TRAPPC1-202ENST00000540486 GH1P01241 217 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms