RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 CEP85Q6P2H3 762 aa12.19□□□□□ -0.46
SSPN-207ENST00000540266 NEK1Q96PY6 1258 aa12.19□□□□□ -0.46
SSPN-207ENST00000540266 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
SSPN-207ENST00000540266 EHMT1Q9H9B1 1298 aa12.19□□□□□ -0.46
SSPN-207ENST00000540266 PNMA2Q9UL42 364 aa12.19□□□□□ -0.46
SSPN-207ENST00000540266 C17orf102A2RUQ5 167 aa12.18□□□□□ -0.46
SSPN-207ENST00000540266 CTSHP09668 335 aa12.18□□□□□ -0.46
SSPN-207ENST00000540266 AOC1P19801 751 aa12.18□□□□□ -0.46
SSPN-207ENST00000540266 COL9A2Q14055 689 aaPredicted RBP12.18□□□□□ -0.46
SSPN-207ENST00000540266 DUSP6Q16828 381 aa12.18□□□□□ -0.46
SSPN-207ENST00000540266 RSPO4Q2I0M5 234 aaPredicted RBP12.18□□□□□ -0.46
SSPN-207ENST00000540266 PPP4R3BQ5MIZ7 849 aa12.18□□□□□ -0.46
SSPN-207ENST00000540266 MYSM1Q5VVJ2 828 aa12.18□□□□□ -0.46
SSPN-207ENST00000540266 ANKRD54Q6NXT1 300 aa12.18□□□□□ -0.46
SSPN-207ENST00000540266 CLASRPQ8N2M8 674 aaKnown RBP12.18□□□□□ -0.46
SSPN-207ENST00000540266 DTWD2Q8NBA8 298 aa12.18□□□□□ -0.46
SSPN-207ENST00000540266 KCNG4Q8TDN1 519 aa12.18□□□□□ -0.46
SSPN-207ENST00000540266 DCAF4Q8WV16 495 aa12.18□□□□□ -0.46
SSPN-207ENST00000540266 CDCA3Q99618 268 aaPredicted RBP12.18□□□□□ -0.46
SSPN-207ENST00000540266 RNPEPQ9H4A4 650 aa12.18□□□□□ -0.46
SSPN-207ENST00000540266 NR2E1Q9Y466 385 aa12.18□□□□□ -0.46
SSPN-207ENST00000540266 OTOGLQ3ZCN5 2332 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 RALGAPA2Q2PPJ7 1873 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 SPTBN2O15020 2390 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 FSD2A1L4K1 749 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 C2CD4DB7Z1M9 353 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 NMT2O60551 498 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 CHRNA1P02708 482 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 IFIT2P09913 472 aaKnown RBP12.17□□□□□ -0.46
SSPN-207ENST00000540266 SP100P23497 879 aaPredicted RBP12.17□□□□□ -0.46
SSPN-207ENST00000540266 STXBP2Q15833 593 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 HSDL1Q3SXM5 330 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 ZSCAN25Q6NSZ9 544 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 CMTR2Q8IYT2 770 aaKnown RBP12.17□□□□□ -0.46
SSPN-207ENST00000540266 RASGRP4Q8TDF6 673 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 NSUN6Q8TEA1 469 aaKnown RBP12.17□□□□□ -0.46
SSPN-207ENST00000540266 TBC1D5Q92609 795 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 OSBP2Q969R2 916 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 TAAR1Q96RJ0 339 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 IWS1Q96ST2 819 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 MAF1Q9H063 256 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 COL20A1Q9P218 1284 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 STX8Q9UNK0 236 aa12.17□□□□□ -0.46
SSPN-207ENST00000540266 WDR19Q8NEZ3 1342 aa12.16□□□□□ -0.46
SSPN-207ENST00000540266 MAP1BP46821 2468 aaKnown RBP12.16□□□□□ -0.46
SSPN-207ENST00000540266 EIF3JO75822 258 aaKnown RBP12.16□□□□□ -0.46
SSPN-207ENST00000540266 SMIM10L2AP0DMW4 78 aa12.16□□□□□ -0.46
SSPN-207ENST00000540266 SMIM10L2BP0DMW5 78 aa12.16□□□□□ -0.46
SSPN-207ENST00000540266 PYGBP11216 843 aa12.16□□□□□ -0.46
SSPN-207ENST00000540266 HOXB8P17481 243 aaPredicted RBP12.16□□□□□ -0.46
SSPN-207ENST00000540266 ADAM17P78536 824 aa12.16□□□□□ -0.46
SSPN-207ENST00000540266 HSP90AB4PQ58FF6 505 aa12.16□□□□□ -0.46
SSPN-207ENST00000540266 CELF3Q5SZQ8 465 aaKnown RBP12.16□□□□□ -0.46
SSPN-207ENST00000540266 SMYD5Q6GMV2 418 aa12.16□□□□□ -0.46
SSPN-207ENST00000540266 SYTL5Q8TDW5 730 aaPredicted RBP12.16□□□□□ -0.46
SSPN-207ENST00000540266 RUBCNQ92622 972 aa12.16□□□□□ -0.46
SSPN-207ENST00000540266 FRAT1Q92837 279 aaPredicted RBP12.16□□□□□ -0.46
SSPN-207ENST00000540266 MFSD1Q9H3U5 465 aa12.16□□□□□ -0.46
SSPN-207ENST00000540266 GPR179Q6PRD1 2367 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 PATL2C9JE40 543 aaKnown RBP12.15□□□□□ -0.46
SSPN-207ENST00000540266 H3BRB1 525 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 FSCN2O14926 492 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 ASGR2P07307 311 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 PDIA4P13667 645 aaKnown RBP12.15□□□□□ -0.46
SSPN-207ENST00000540266 ERVFC1P60507 584 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 UBE3AQ05086 875 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 LPIN1Q14693 890 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 RTN4RL1Q86UN2 441 aaPredicted RBP12.15□□□□□ -0.46
SSPN-207ENST00000540266 IFNL3Q8IZI9 196 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 DCLK2Q8N568 766 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 CYP2W1Q8TAV3 490 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 KIF1BPQ96EK5 621 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 TUT1Q9H6E5 874 aaKnown RBP12.15□□□□□ -0.46
SSPN-207ENST00000540266 CDH22Q9UJ99 828 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 RALYQ9UKM9 306 aaKnown RBP12.15□□□□□ -0.46
SSPN-207ENST00000540266 R4GN57 208 aa12.15□□□□□ -0.46
SSPN-207ENST00000540266 NLRC5Q86WI3 1866 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 ANP32CO43423 234 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 GNAT2P19087 354 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 TECP42680 631 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 TDO2P48775 406 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 ATXN1P54253 815 aaKnown RBP12.14□□□□□ -0.47
SSPN-207ENST00000540266 SP2Q02086 613 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 CCDC96Q2M329 555 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 ZDHHC14Q8IZN3 488 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 FLCNQ8NFG4 579 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 MICAL1Q8TDZ2 1067 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 LINC01599Q8WXQ3 324 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 SPATA33Q96N06 139 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 RMDN3Q96TC7 470 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 RTP3Q9BQQ7 232 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 APOL5Q9BWW9 433 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 KDM4CQ9H3R0 1056 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 POMKQ9H5K3 350 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 LIMD1Q9UGP4 676 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.14□□□□□ -0.47
SSPN-207ENST00000540266 MRVI1Q9Y6F6 885 aa12.14□□□□□ -0.47
SSPN-207ENST00000540266 GPAA1O43292 621 aa12.13□□□□□ -0.47
SSPN-207ENST00000540266 PPFIA3O75145 1194 aa12.13□□□□□ -0.47
SSPN-207ENST00000540266 GHRP10912 638 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms